Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm36776-201ENSMUST00000207006 203 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm18188-201ENSMUST00000219386 478 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm9818-201ENSMUST00000050900 255 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm26204-201ENSMUST00000082906 107 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm24410-201ENSMUST00000083433 107 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a1Q04857 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm14803-201ENSMUST00000117163 361 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm23002-201ENSMUST00000179221 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm22450-201ENSMUST00000179641 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm25473-201ENSMUST00000180191 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm45860-201ENSMUST00000212700 334 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm22062-201ENSMUST00000082563 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm26071-201ENSMUST00000083261 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Gm24521-201ENSMUST00000083958 107 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.23□□□□□ -1.73
Col6a1Q04857 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a1Q04857 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm26140-201ENSMUST00000103807 110 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm6829-201ENSMUST00000119858 360 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm14551-201ENSMUST00000120802 256 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm22027-201ENSMUST00000122737 127 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm23415-201ENSMUST00000175519 83 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm21960-201ENSMUST00000181924 452 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Mir6540-201ENSMUST00000184886 108 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm44355-201ENSMUST00000200417 104 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm32222-201ENSMUST00000203296 298 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.22□□□□□ -1.73
Col6a1Q04857 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.22□□□□□ -1.73
Col6a1Q04857 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.22□□□□□ -1.73
Col6a1Q04857 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.21□□□□□ -1.73
Col6a1Q04857 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Col6a1Q04857 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Col6a1Q04857 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm16218-201ENSMUST00000155424 388 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm25863-201ENSMUST00000158249 329 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a1Q04857 Mir7081-201ENSMUST00000184490 75 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a1Q04857 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm44922-201ENSMUST00000206690 90 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm18213-201ENSMUST00000207850 178 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm21007-201ENSMUST00000221024 326 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm25800-201ENSMUST00000082636 134 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm22154-201ENSMUST00000083844 131 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm10161-201ENSMUST00000091506 204 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col6a1Q04857 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col6a1Q04857 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.21□□□□□ -1.74
Col6a1Q04857 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a1Q04857 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm12797-201ENSMUST00000118645 273 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm14649-201ENSMUST00000121814 324 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm11281-201ENSMUST00000141391 576 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm24552-201ENSMUST00000158646 103 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm17186-201ENSMUST00000171742 456 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms