Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Gm3025-201ENSMUST00000163454 489 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Gm2878-201ENSMUST00000170173 486 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Gm23860-201ENSMUST00000179446 132 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Mir6382-201ENSMUST00000184055 110 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Mir3068-202ENSMUST00000197755 79 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Gm44384-201ENSMUST00000200208 114 ntBASIC1.71□□□□□ -2.14
Tpm1P58771 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Tpm1P58771 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Tpm1P58771 Gm13378-201ENSMUST00000117483 336 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Gm26181-201ENSMUST00000157687 106 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Mir3086-201ENSMUST00000175072 87 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Gm24333-201ENSMUST00000175101 84 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Tpm1P58771 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Tpm1P58771 Gm25020-201ENSMUST00000178071 107 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Gm4076-201ENSMUST00000179230 965 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 Gm27588-201ENSMUST00000185096 263 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.7□□□□□ -2.14
Tpm1P58771 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Tpm1P58771 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Tpm1P58771 Gm26342-201ENSMUST00000104557 129 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Mir1193-201ENSMUST00000116761 121 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm14215-201ENSMUST00000120578 221 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm13433-201ENSMUST00000121701 240 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.69□□□□□ -2.14
Tpm1P58771 Mir1942-201ENSMUST00000157274 63 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm23548-201ENSMUST00000158963 106 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm44609-201ENSMUST00000207157 460 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm18453-201ENSMUST00000208000 626 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.69□□□□□ -2.14
Tpm1P58771 Gm46103-201ENSMUST00000217614 341 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.69□□□□□ -2.14
Tpm1P58771 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm23517-201ENSMUST00000082830 192 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm24805-201ENSMUST00000082931 104 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Gm23848-201ENSMUST00000083826 106 ntBASIC1.69□□□□□ -2.14
Tpm1P58771 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Tpm1P58771 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Tpm1P58771 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Tpm1P58771 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Tpm1P58771 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Gm23202-201ENSMUST00000104376 129 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Gm25625-201ENSMUST00000157221 96 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Gm17113-201ENSMUST00000170118 171 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Gm8114-201ENSMUST00000172225 484 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.68□□□□□ -2.14
Tpm1P58771 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm13885-201ENSMUST00000117569 187 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm14599-201ENSMUST00000120469 474 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm16129-201ENSMUST00000152628 486 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm22217-201ENSMUST00000157556 313 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm24358-201ENSMUST00000158424 288 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm23963-201ENSMUST00000179603 77 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.67□□□□□ -2.14
Tpm1P58771 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.67□□□□□ -2.14
Tpm1P58771 Gm17991-201ENSMUST00000208139 297 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Tpm1P58771 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Tpm1P58771 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.67□□□□□ -2.14
Tpm1P58771 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Tpm1P58771 Gm26265-201ENSMUST00000083277 135 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Mir322-201ENSMUST00000083484 95 ntBASIC1.67□□□□□ -2.14
Tpm1P58771 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Tpm1P58771 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Tpm1P58771 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Tpm1P58771 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Tpm1P58771 Gm27396-201ENSMUST00000157708 58 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm23221-201ENSMUST00000158118 93 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Snord87-201ENSMUST00000175437 87 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm21737-201ENSMUST00000178112 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm25156-201ENSMUST00000179809 79 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm21729-201ENSMUST00000180058 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm21853-201ENSMUST00000180071 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm20901-201ENSMUST00000180177 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29073-201ENSMUST00000185563 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29495-201ENSMUST00000189319 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm28090-201ENSMUST00000189458 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm21647-201ENSMUST00000189755 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29657-201ENSMUST00000189807 342 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29165-201ENSMUST00000190655 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29211-201ENSMUST00000191470 664 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm36891-201ENSMUST00000191995 655 ntBASIC1.66□□□□□ -2.14
Tpm1P58771 Gm29950-201ENSMUST00000195273 237 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms