Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.19□□□□□ -2.06
Sox3P53784 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.19□□□□□ -2.06
Sox3P53784 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.19□□□□□ -2.06
Sox3P53784 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.19□□□□□ -2.06
Sox3P53784 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sox3P53784 Gm25796-201ENSMUST00000082645 163 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Snord104-201ENSMUST00000083192 70 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Gm23727-201ENSMUST00000083352 164 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Mir222-201ENSMUST00000083537 79 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Mir423-201ENSMUST00000083584 109 ntBASIC2.19□□□□□ -2.06
Sox3P53784 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sox3P53784 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Sox3P53784 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sox3P53784 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm6954-201ENSMUST00000117416 225 ntBASIC2.18□□□□□ -2.06
Sox3P53784 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm15900-201ENSMUST00000161584 342 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm17062-201ENSMUST00000166987 461 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm23144-201ENSMUST00000180226 107 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Mir496b-201ENSMUST00000184935 113 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm28825-201ENSMUST00000186233 238 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm18964-201ENSMUST00000193013 563 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm37771-201ENSMUST00000193121 265 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sox3P53784 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.18□□□□□ -2.06
Sox3P53784 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.18□□□□□ -2.06
Sox3P53784 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.18□□□□□ -2.06
Sox3P53784 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Sox3P53784 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Sox3P53784 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Sox3P53784 Mir687-201ENSMUST00000102166 89 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm22270-201ENSMUST00000104034 132 ntBASIC2.17□□□□□ -2.06
Sox3P53784 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm14073-201ENSMUST00000117344 381 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm12053-201ENSMUST00000119022 252 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm5287-201ENSMUST00000120666 598 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm11358-201ENSMUST00000122310 373 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Sox3P53784 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.17□□□□□ -2.06
Sox3P53784 Gm24212-201ENSMUST00000158258 132 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm22517-201ENSMUST00000158265 136 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm24546-201ENSMUST00000158652 102 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm23005-201ENSMUST00000158950 136 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm7592-201ENSMUST00000160674 627 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm8292-201ENSMUST00000162574 396 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm24315-201ENSMUST00000177835 127 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm22631-201ENSMUST00000179656 94 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm27660-201ENSMUST00000184028 208 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm28744-201ENSMUST00000189939 340 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm19193-201ENSMUST00000190263 590 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm37037-201ENSMUST00000194475 424 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.17□□□□□ -2.06
Sox3P53784 Mir3069-201ENSMUST00000198802 65 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm19032-201ENSMUST00000208584 592 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm19140-201ENSMUST00000209790 421 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Sox3P53784 Gm24313-201ENSMUST00000082561 133 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm23096-201ENSMUST00000083447 107 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Gm25628-201ENSMUST00000084002 105 ntBASIC2.17□□□□□ -2.06
Sox3P53784 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Sox3P53784 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Sox3P53784 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Sox3P53784 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm23422-201ENSMUST00000102000 107 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm22771-201ENSMUST00000104449 91 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm15714-201ENSMUST00000117168 250 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm14558-201ENSMUST00000117458 381 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm15183-201ENSMUST00000118933 348 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm22793-201ENSMUST00000157227 330 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm24771-201ENSMUST00000158508 137 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Mir1927-201ENSMUST00000158579 109 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Mir669n-201ENSMUST00000158636 54 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Mir5099-201ENSMUST00000175257 74 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Mir7667-201ENSMUST00000183866 63 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm18185-201ENSMUST00000186725 667 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm28404-201ENSMUST00000190242 453 ntBASIC2.16□□□□□ -2.06
Sox3P53784 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sox3P53784 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.16□□□□□ -2.06
Sox3P53784 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sox3P53784 Snord38a-201ENSMUST00000083746 71 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Olfr575-201ENSMUST00000084812 957 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.16□□□□□ -2.06
Sox3P53784 Gm381-201ENSMUST00000117443 2037 ntBASIC2.15□□□□□ -2.06
Sox3P53784 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.15□□□□□ -2.06
Sox3P53784 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Sox3P53784 Gm15846-201ENSMUST00000116022 320 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm12697-201ENSMUST00000118008 667 ntBASIC2.15□□□□□ -2.07
Sox3P53784 Gm14652-201ENSMUST00000118479 235 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms