Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm7984-201ENSMUST00000060640 538 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm22572-201ENSMUST00000082985 105 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.09□□□□□ -2.08
Col2a1P28481 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col2a1P28481 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col2a1P28481 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Col2a1P28481 Gm11512-201ENSMUST00000119669 663 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm11834-201ENSMUST00000122257 585 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm24901-201ENSMUST00000158125 110 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm22633-201ENSMUST00000179834 107 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm21729-201ENSMUST00000180058 664 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm21853-201ENSMUST00000180071 664 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm8151-201ENSMUST00000184817 871 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm29495-201ENSMUST00000189319 664 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm8041-201ENSMUST00000199755 616 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm29848-201ENSMUST00000203107 295 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.08□□□□□ -2.08
Col2a1P28481 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col2a1P28481 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col2a1P28481 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
Col2a1P28481 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col2a1P28481 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.08□□□□□ -2.08
Col2a1P28481 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col2a1P28481 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Col2a1P28481 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col2a1P28481 Gm15896-201ENSMUST00000118045 440 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm14008-201ENSMUST00000120483 274 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm17065-201ENSMUST00000165245 239 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm17538-201ENSMUST00000168236 327 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.07□□□□□ -2.08
Col2a1P28481 Gm22853-201ENSMUST00000174974 131 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm27894-201ENSMUST00000184177 92 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm28794-201ENSMUST00000185276 136 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm7654-201ENSMUST00000186738 683 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm19572-201ENSMUST00000214326 338 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col2a1P28481 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Col2a1P28481 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col2a1P28481 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.07□□□□□ -2.08
Col2a1P28481 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm12053-201ENSMUST00000119022 252 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm12806-201ENSMUST00000119384 268 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm11522-201ENSMUST00000120533 176 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm24713-201ENSMUST00000178850 107 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm25448-201ENSMUST00000180065 107 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Col2a1P28481 Gm29216-201ENSMUST00000187117 492 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm37757-201ENSMUST00000193072 210 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm44295-201ENSMUST00000203805 437 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.07□□□□□ -2.08
Col2a1P28481 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.07□□□□□ -2.08
Col2a1P28481 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col2a1P28481 Gm22740-201ENSMUST00000083439 109 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Gm23093-201ENSMUST00000083450 102 ntBASIC2.07□□□□□ -2.08
Col2a1P28481 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col2a1P28481 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col2a1P28481 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Col2a1P28481 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.06□□□□□ -2.08
Col2a1P28481 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm22656-201ENSMUST00000104199 171 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm14020-201ENSMUST00000118165 662 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm24439-201ENSMUST00000157894 117 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Gm22316-201ENSMUST00000158012 216 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm22851-201ENSMUST00000178741 94 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Gm25074-201ENSMUST00000178782 94 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Gm26189-201ENSMUST00000179879 107 ntBASIC2.06□□□□□ -2.08
Col2a1P28481 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col2a1P28481 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms