Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.03□□□□□ -1.76
Hoxd9P28357 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Hoxd9P28357 AC120540.2-201ENSMUST00000221716 387 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Gm25634-201ENSMUST00000082667 105 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Gm24611-201ENSMUST00000083272 107 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Gm25409-201ENSMUST00000083764 131 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Mir466-201ENSMUST00000093591 73 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd9P28357 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.03□□□□□ -1.76
Hoxd9P28357 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd9P28357 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd9P28357 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd9P28357 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.03□□□□□ -1.76
Hoxd9P28357 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd9P28357 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Hoxd9P28357 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hoxd9P28357 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd9P28357 CT025538.3-201ENSMUST00000225279 3848 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm13432-201ENSMUST00000118861 241 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm8200-201ENSMUST00000122390 222 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm26171-201ENSMUST00000158422 131 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Mir6414-201ENSMUST00000183685 82 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm27753-201ENSMUST00000184742 203 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm18015-201ENSMUST00000214879 316 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd9P28357 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Snora19-201ENSMUST00000082962 132 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm23658-201ENSMUST00000083233 132 ntBASIC4.02□□□□□ -1.77
Hoxd9P28357 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd9P28357 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd9P28357 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd9P28357 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd9P28357 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd9P28357 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm24717-201ENSMUST00000157522 124 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm22553-201ENSMUST00000157797 295 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm24453-201ENSMUST00000083346 76 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Mir202-201ENSMUST00000083568 72 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd9P28357 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.01□□□□□ -1.77
Hoxd9P28357 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Hoxd9P28357 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hoxd9P28357 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd9P28357 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd9P28357 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd9P28357 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd9P28357 Gm15180-201ENSMUST00000117745 492 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm13092-201ENSMUST00000136346 260 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm24053-201ENSMUST00000158620 105 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm22070-201ENSMUST00000178475 107 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Mir6537-201ENSMUST00000184150 110 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm29104-201ENSMUST00000186304 222 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm37545-201ENSMUST00000186512 148 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm9251-201ENSMUST00000197202 628 ntBASIC4□□□□□ -1.77
Hoxd9P28357 AC150560.2-201ENSMUST00000227208 171 ntBASIC4□□□□□ -1.77
Hoxd9P28357 AC127371.1-202ENSMUST00000228923 306 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm23928-201ENSMUST00000082469 145 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm24030-201ENSMUST00000083931 164 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Mir488-201ENSMUST00000093595 109 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm43844-201ENSMUST00000202926 5605 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Gm2869-201ENSMUST00000124359 2621 ntBASIC4□□□□□ -1.77
Hoxd9P28357 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd9P28357 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd9P28357 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd9P28357 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4□□□□□ -1.77
Hoxd9P28357 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd9P28357 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd9P28357 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd9P28357 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.99□□□□□ -1.77
Hoxd9P28357 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm24788-201ENSMUST00000104283 156 ntBASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm23957-201ENSMUST00000157209 90 ntBASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm23905-201ENSMUST00000157568 109 ntBASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm27308-201ENSMUST00000184807 233 ntBASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd9P28357 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms