Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm30534-201ENSMUST00000217928 207 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.72□□□□□ -2.13
Sdc1P18828 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sdc1P18828 Gm22831-201ENSMUST00000102473 109 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm22497-201ENSMUST00000104499 131 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm7164-201ENSMUST00000117503 450 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm12304-201ENSMUST00000120312 385 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm14638-201ENSMUST00000121338 216 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm25109-201ENSMUST00000122474 114 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.71□□□□□ -2.14
Sdc1P18828 Gm26102-201ENSMUST00000157251 284 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm25373-201ENSMUST00000158156 115 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm24837-201ENSMUST00000158683 81 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm26157-201ENSMUST00000158974 126 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm3111-201ENSMUST00000167426 490 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Mir3965-201ENSMUST00000175570 69 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm21978-201ENSMUST00000179696 377 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm27379-201ENSMUST00000183730 123 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.71□□□□□ -2.14
Sdc1P18828 Gm28058-201ENSMUST00000186421 264 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm42807-201ENSMUST00000200141 329 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.71□□□□□ -2.14
Sdc1P18828 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Sdc1P18828 Gm45226-201ENSMUST00000206602 288 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm45386-201ENSMUST00000210194 218 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 AC130477.2-201ENSMUST00000228158 274 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sdc1P18828 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm26228-201ENSMUST00000082512 107 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm25080-201ENSMUST00000082526 107 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm25698-201ENSMUST00000082897 107 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm26265-201ENSMUST00000083277 135 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Mir10a-201ENSMUST00000083585 110 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm25518-201ENSMUST00000083864 107 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.71□□□□□ -2.14
Sdc1P18828 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Sdc1P18828 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Sdc1P18828 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Sdc1P18828 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm22752-201ENSMUST00000102083 109 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm23184-201ENSMUST00000122594 131 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm23668-201ENSMUST00000157465 111 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm22517-201ENSMUST00000158265 136 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm23005-201ENSMUST00000158950 136 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm22192-201ENSMUST00000175128 85 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm24518-201ENSMUST00000180275 94 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Mir6995-201ENSMUST00000183658 71 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Mir6950-201ENSMUST00000184438 73 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm38333-201ENSMUST00000193608 604 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm37361-201ENSMUST00000194345 132 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm44011-201ENSMUST00000203336 394 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Sdc1P18828 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm25632-201ENSMUST00000083112 85 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm24412-201ENSMUST00000083426 109 ntBASIC1.7□□□□□ -2.14
Sdc1P18828 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.7□□□□□ -2.14
Sdc1P18828 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Sdc1P18828 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
Sdc1P18828 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Sdc1P18828 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Sdc1P18828 Gm7916-201ENSMUST00000120325 456 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Gm12897-201ENSMUST00000120341 250 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Gm25866-201ENSMUST00000158245 112 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Mir7578-201ENSMUST00000183455 82 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.69□□□□□ -2.14
Sdc1P18828 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Sdc1P18828 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Mir107-201ENSMUST00000083660 87 ntBASIC1.69□□□□□ -2.14
Sdc1P18828 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Sdc1P18828 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc1P18828 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Mir466k-201ENSMUST00000116774 122 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm22678-201ENSMUST00000116974 101 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm12393-201ENSMUST00000117084 848 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm13728-201ENSMUST00000117471 400 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm13885-201ENSMUST00000117569 187 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.68□□□□□ -2.14
Sdc1P18828 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.68□□□□□ -2.14
Sdc1P18828 Gm23342-201ENSMUST00000158958 115 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm17072-201ENSMUST00000166673 658 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Sdc1P18828 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Sdc1P18828 Mir7016-201ENSMUST00000184308 72 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm27588-201ENSMUST00000185096 263 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm29550-201ENSMUST00000185543 285 ntBASIC1.68□□□□□ -2.14
Sdc1P18828 Gm18356-201ENSMUST00000185677 623 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms