Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Cdx1P18111 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Cdx1P18111 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm25094-201ENSMUST00000103992 131 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm23202-201ENSMUST00000104376 129 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cdx1P18111 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cdx1P18111 Gm12393-201ENSMUST00000117084 848 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm14558-201ENSMUST00000117458 381 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm13885-201ENSMUST00000117569 187 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.72□□□□□ -2.13
Cdx1P18111 Mir1942-201ENSMUST00000157274 63 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm22716-201ENSMUST00000177596 107 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.72□□□□□ -2.13
Cdx1P18111 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm42805-201ENSMUST00000196158 276 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm43587-201ENSMUST00000199590 204 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.72□□□□□ -2.13
Cdx1P18111 Gm44938-201ENSMUST00000208614 427 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.72□□□□□ -2.13
Cdx1P18111 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cdx1P18111 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cdx1P18111 Mir344e-201ENSMUST00000104677 66 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm12871-201ENSMUST00000118758 438 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Cdx1P18111 Gm23752-201ENSMUST00000157584 115 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm25706-201ENSMUST00000157828 247 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm24857-201ENSMUST00000158061 310 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm25557-201ENSMUST00000158084 315 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm24464-201ENSMUST00000179697 107 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm26622-201ENSMUST00000180520 298 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Mir7226-201ENSMUST00000184953 60 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Mir3569-201ENSMUST00000185080 58 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm27588-201ENSMUST00000185096 263 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm28745-201ENSMUST00000190069 305 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm37946-201ENSMUST00000192064 347 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm36984-201ENSMUST00000192770 235 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.71□□□□□ -2.14
Cdx1P18111 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.71□□□□□ -2.14
Cdx1P18111 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Gm9973-202ENSMUST00000220926 166 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cdx1P18111 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.71□□□□□ -2.14
Cdx1P18111 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cdx1P18111 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdx1P18111 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm15309-201ENSMUST00000121644 240 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.7□□□□□ -2.14
Cdx1P18111 Gm25460-201ENSMUST00000157954 127 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm23068-201ENSMUST00000158239 293 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm23196-201ENSMUST00000158806 107 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cdx1P18111 Gm21673-201ENSMUST00000186640 436 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm21135-201ENSMUST00000189023 436 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm28299-201ENSMUST00000189908 339 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm18775-201ENSMUST00000190763 586 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm38041-201ENSMUST00000194445 661 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.7□□□□□ -2.14
Cdx1P18111 Gm45252-201ENSMUST00000211579 397 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.7□□□□□ -2.14
Cdx1P18111 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm26265-201ENSMUST00000083277 135 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Gm23454-201ENSMUST00000083332 133 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cdx1P18111 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdx1P18111 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.7□□□□□ -2.14
Cdx1P18111 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Cdx1P18111 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cdx1P18111 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.69□□□□□ -2.14
Cdx1P18111 Mir873a-201ENSMUST00000104863 77 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm11438-201ENSMUST00000121582 189 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm12956-201ENSMUST00000122184 414 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm17085-201ENSMUST00000165425 502 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cdx1P18111 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cdx1P18111 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Cdx1P18111 Gm44564-201ENSMUST00000207985 180 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm45754-201ENSMUST00000212380 279 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm26328-201ENSMUST00000082821 107 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Gm25794-201ENSMUST00000083286 107 ntBASIC1.69□□□□□ -2.14
Cdx1P18111 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cdx1P18111 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms