Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Mir190b-201ENSMUST00000104803 80 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Gm14713-201ENSMUST00000122362 686 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lire1P11260 Gm2930-201ENSMUST00000170403 474 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lire1P11260 Gm23862-201ENSMUST00000180342 94 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lire1P11260 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Gm10193-201ENSMUST00000188288 231 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Mir378a-201ENSMUST00000198300 66 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Gm44011-201ENSMUST00000203336 394 ntBASIC2.37□□□□□ -2.03
Lire1P11260 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.37□□□□□ -2.03
Lire1P11260 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Lire1P11260 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lire1P11260 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
Lire1P11260 Gm22831-201ENSMUST00000102473 109 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm23803-201ENSMUST00000104610 132 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm24274-201ENSMUST00000116787 124 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.36□□□□□ -2.03
Lire1P11260 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.36□□□□□ -2.03
Lire1P11260 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.36□□□□□ -2.03
Lire1P11260 Gm25113-201ENSMUST00000157185 143 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm22668-201ENSMUST00000158716 260 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm5900-201ENSMUST00000179862 375 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm27511-201ENSMUST00000183502 127 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Mir6399-201ENSMUST00000184050 84 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm28399-201ENSMUST00000186221 318 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm28572-201ENSMUST00000187444 318 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm43626-201ENSMUST00000198575 162 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Lire1P11260 Gm7692-201ENSMUST00000213534 409 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.36□□□□□ -2.03
Lire1P11260 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.36□□□□□ -2.03
Lire1P11260 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.36□□□□□ -2.03
Lire1P11260 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.36□□□□□ -2.03
Lire1P11260 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.36□□□□□ -2.03
Lire1P11260 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.36□□□□□ -2.03
Lire1P11260 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm26328-201ENSMUST00000082821 107 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm25794-201ENSMUST00000083286 107 ntBASIC2.36□□□□□ -2.03
Lire1P11260 Gm23264-201ENSMUST00000083372 107 ntBASIC2.36□□□□□ -2.03
Lire1P11260 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Lire1P11260 Gm25339-201ENSMUST00000157458 232 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm22076-201ENSMUST00000158601 84 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm7592-201ENSMUST00000160674 627 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm8532-201ENSMUST00000179174 461 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Mir8090-201ENSMUST00000185078 136 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm27588-201ENSMUST00000185096 263 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm27959-201ENSMUST00000185172 111 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm28560-201ENSMUST00000186091 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm28334-201ENSMUST00000186653 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm28495-201ENSMUST00000188452 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm28232-201ENSMUST00000188683 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm28481-201ENSMUST00000189231 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm29059-201ENSMUST00000191534 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm37765-201ENSMUST00000192395 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm37237-201ENSMUST00000192893 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm36968-201ENSMUST00000193737 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm38290-201ENSMUST00000195238 315 ntBASIC2.35□□□□□ -2.03
Lire1P11260 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.35□□□□□ -2.03
Lire1P11260 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.35□□□□□ -2.03
Lire1P11260 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.35□□□□□ -2.03
Lire1P11260 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm24151-201ENSMUST00000082758 141 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm22229-201ENSMUST00000082987 108 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm26265-201ENSMUST00000083277 135 ntBASIC2.35□□□□□ -2.03
Lire1P11260 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Lire1P11260 Gm6574-201ENSMUST00000120037 362 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Gm12639-201ENSMUST00000121400 493 ntBASIC2.34□□□□□ -2.03
Lire1P11260 U6.1-201ENSMUST00000157443 101 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Gm22666-201ENSMUST00000158717 164 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Gm26157-201ENSMUST00000158974 126 ntBASIC2.34□□□□□ -2.03
Lire1P11260 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Lire1P11260 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.34□□□□□ -2.03
Lire1P11260 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Lire1P11260 Gm22620-201ENSMUST00000082700 133 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Mir151-201ENSMUST00000083678 68 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Snora33-201ENSMUST00000093556 129 ntBASIC2.34□□□□□ -2.03
Lire1P11260 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Lire1P11260 Gm15844-201ENSMUST00000118016 576 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.33□□□□□ -2.04
Lire1P11260 Gm24997-201ENSMUST00000157910 105 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm27878-201ENSMUST00000184000 106 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.33□□□□□ -2.04
Lire1P11260 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.33□□□□□ -2.04
Lire1P11260 Gm37361-201ENSMUST00000194345 132 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm42925-201ENSMUST00000197359 285 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Lire1P11260 Gm18346-201ENSMUST00000216782 325 ntBASIC2.33□□□□□ -2.04
Lire1P11260 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.33□□□□□ -2.04
Lire1P11260 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.33□□□□□ -2.04
Lire1P11260 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm26494-201ENSMUST00000083154 143 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Mir10a-201ENSMUST00000083585 110 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms