Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.06□□□□□ -2.24
Col1a1P11087 Gm43286-201ENSMUST00000197420 424 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Mir300-201ENSMUST00000083485 79 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Col1a1P11087 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm24142-201ENSMUST00000101960 107 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Mir208b-201ENSMUST00000104735 77 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm13602-201ENSMUST00000122405 493 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm26275-201ENSMUST00000157101 268 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm17085-201ENSMUST00000165425 502 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm27587-201ENSMUST00000185116 163 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Col1a1P11087 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm18775-201ENSMUST00000190763 586 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.05□□□□□ -2.24
Col1a1P11087 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col1a1P11087 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
Col1a1P11087 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm12640-201ENSMUST00000120097 310 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm20698-201ENSMUST00000175657 233 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
Col1a1P11087 Mir6376-201ENSMUST00000185149 131 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm29603-201ENSMUST00000186792 334 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm43897-201ENSMUST00000204019 309 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Gm44446-201ENSMUST00000204864 255 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col1a1P11087 Gm25788-201ENSMUST00000082721 131 ntBASIC1.05□□□□□ -2.24
Col1a1P11087 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Col1a1P11087 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Col1a1P11087 Gm13731-201ENSMUST00000117332 196 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm15126-201ENSMUST00000118631 833 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Mir3109-201ENSMUST00000175301 88 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm23355-201ENSMUST00000177614 107 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm26206-201ENSMUST00000082908 110 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm23721-201ENSMUST00000083005 107 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Gm24412-201ENSMUST00000083426 109 ntBASIC1.04□□□□□ -2.24
Col1a1P11087 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Col1a1P11087 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm11572-201ENSMUST00000119164 120 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm14049-201ENSMUST00000121009 636 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm24908-201ENSMUST00000157294 127 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm22535-201ENSMUST00000158174 119 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm24323-201ENSMUST00000175342 77 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20794-201ENSMUST00000177626 628 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm22583-201ENSMUST00000178031 107 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm28356-202ENSMUST00000187566 858 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm9541-201ENSMUST00000188409 502 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20885-201ENSMUST00000190192 654 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm33571-201ENSMUST00000193271 657 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm36866-201ENSMUST00000193343 657 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm36047-201ENSMUST00000193659 657 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20857-201ENSMUST00000194766 657 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm20858-201ENSMUST00000195459 657 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm30638-201ENSMUST00000195570 656 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.03□□□□□ -2.24
Col1a1P11087 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Col1a1P11087 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.03□□□□□ -2.24
Col1a1P11087 Gm46994-201ENSMUST00000221523 219 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm23517-201ENSMUST00000082830 192 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.03□□□□□ -2.24
Col1a1P11087 Gm24594-201ENSMUST00000122502 99 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.02□□□□□ -2.25
Col1a1P11087 Gm16354-201ENSMUST00000155376 150 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm25375-201ENSMUST00000158157 135 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm23180-201ENSMUST00000158686 125 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm27522-201ENSMUST00000183949 230 ntBASIC1.02□□□□□ -2.25
Col1a1P11087 Gm20058-201ENSMUST00000186939 284 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms