Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3□□□□□ -1.93
Col3a1P08121 AC129308.2-201ENSMUST00000224588 789 ntBASIC3□□□□□ -1.93
Col3a1P08121 AC125311.1-201ENSMUST00000226950 220 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm23447-201ENSMUST00000082798 163 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm23444-201ENSMUST00000082922 191 ntBASIC3□□□□□ -1.93
Col3a1P08121 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col3a1P08121 Gm43326-201ENSMUST00000198459 1638 ntBASIC3□□□□□ -1.93
Col3a1P08121 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col3a1P08121 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Col3a1P08121 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm13378-201ENSMUST00000117483 336 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm12042-201ENSMUST00000120479 301 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm14977-201ENSMUST00000121626 812 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm6956-201ENSMUST00000134724 546 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm23545-201ENSMUST00000158205 104 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm24212-201ENSMUST00000158258 132 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm25362-201ENSMUST00000158854 105 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col3a1P08121 Gm24863-201ENSMUST00000179499 107 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm28717-201ENSMUST00000189950 315 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm18964-201ENSMUST00000193013 563 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm43739-201ENSMUST00000198294 307 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Mir7227-201ENSMUST00000200408 59 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.99□□□□□ -1.93
Col3a1P08121 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.99□□□□□ -1.93
Col3a1P08121 Gm44903-201ENSMUST00000206840 130 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm45252-201ENSMUST00000211579 397 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm18000-201ENSMUST00000212153 800 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm6030-201ENSMUST00000078768 402 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm26439-201ENSMUST00000082592 106 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm23939-201ENSMUST00000082880 133 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm22169-201ENSMUST00000083229 107 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm25126-201ENSMUST00000083343 102 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm23847-201ENSMUST00000083829 110 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Gm25937-201ENSMUST00000083912 107 ntBASIC2.99□□□□□ -1.93
Col3a1P08121 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col3a1P08121 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col3a1P08121 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col3a1P08121 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col3a1P08121 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
Col3a1P08121 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Col3a1P08121 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col3a1P08121 Mir147-201ENSMUST00000102354 79 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm13314-201ENSMUST00000118742 335 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm14359-201ENSMUST00000118883 424 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm25150-201ENSMUST00000157121 60 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm23169-201ENSMUST00000157157 112 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm23258-201ENSMUST00000158319 106 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm17062-201ENSMUST00000166987 461 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm22448-201ENSMUST00000179254 107 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm26180-201ENSMUST00000179942 107 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Mir6363-201ENSMUST00000184880 114 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm29147-201ENSMUST00000186846 315 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm28160-201ENSMUST00000191229 315 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm22897-201ENSMUST00000197860 128 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm44336-201ENSMUST00000203696 468 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm46389-201ENSMUST00000223199 392 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col3a1P08121 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm25008-201ENSMUST00000083809 81 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col3a1P08121 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col3a1P08121 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.98□□□□□ -1.93
Col3a1P08121 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Col3a1P08121 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24889-201ENSMUST00000104388 132 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm12255-201ENSMUST00000117184 284 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm14771-201ENSMUST00000118249 203 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm13880-201ENSMUST00000118421 474 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm12871-201ENSMUST00000118758 438 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm12806-201ENSMUST00000119384 268 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm14049-201ENSMUST00000121009 636 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm15536-201ENSMUST00000121411 114 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm13406-201ENSMUST00000121991 256 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.97□□□□□ -1.93
Col3a1P08121 Gm26102-201ENSMUST00000157251 284 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24504-201ENSMUST00000157679 100 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24584-201ENSMUST00000157972 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm23660-201ENSMUST00000178362 79 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24088-201ENSMUST00000179100 79 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm22286-201ENSMUST00000179708 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm3010-201ENSMUST00000198805 448 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm9068-201ENSMUST00000217393 455 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.97□□□□□ -1.93
Col3a1P08121 Gm9318-201ENSMUST00000222444 438 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms