| Hoxa4 | P06798 | Trbv5-201 | ENSMUST00000103266 | 368 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Ighv1-54-201 | ENSMUST00000103525 | 377 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm13085-201 | ENSMUST00000118356 | 171 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm13711-201 | ENSMUST00000119708 | 453 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm15807-201 | ENSMUST00000119880 | 1128 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm26255-201 | ENSMUST00000122492 | 103 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm23214-201 | ENSMUST00000122716 | 157 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm8121-201 | ENSMUST00000153583 | 499 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24784-201 | ENSMUST00000157640 | 62 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24857-201 | ENSMUST00000158061 | 310 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24212-201 | ENSMUST00000158258 | 132 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Vmn2r-ps70-201 | ENSMUST00000174636 | 302 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24816-201 | ENSMUST00000175311 | 151 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Mir3076-201 | ENSMUST00000175415 | 60 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | 9230113P08Rik-202 | ENSMUST00000176153 | 414 nt | APPRIS P5 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm21797-201 | ENSMUST00000177579 | 543 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Esp4-201 | ENSMUST00000178498 | 553 nt | APPRIS P1 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm21767-201 | ENSMUST00000178689 | 543 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm21822-201 | ENSMUST00000179302 | 543 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm26092-201 | ENSMUST00000179798 | 97 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Snord116l14-201 | ENSMUST00000179875 | 94 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Mir669a-1-201 | ENSMUST00000180238 | 97 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm28016-201 | ENSMUST00000184594 | 196 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm7858-201 | ENSMUST00000190177 | 622 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Ighv12-1-201 | ENSMUST00000195542 | 329 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Mir7116-201 | ENSMUST00000195956 | 70 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm15235-201 | ENSMUST00000200572 | 194 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm43991-201 | ENSMUST00000203751 | 274 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm44519-201 | ENSMUST00000206486 | 122 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm45445-201 | ENSMUST00000209586 | 232 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC122393.3-201 | ENSMUST00000226343 | 1059 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC147545.1-201 | ENSMUST00000227528 | 108 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC117588.2-201 | ENSMUST00000228340 | 311 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr869-201 | ENSMUST00000213024 | 1783 nt | APPRIS P1 TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr1181-203 | ENSMUST00000213190 | 3934 nt | APPRIS P1 TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC115047.2-201 | ENSMUST00000214421 | 1848 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm22831-201 | ENSMUST00000102473 | 109 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Trbv30-201 | ENSMUST00000103282 | 332 nt | APPRIS ALT2 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm15671-201 | ENSMUST00000124160 | 576 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm23599-201 | ENSMUST00000157261 | 251 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm22521-201 | ENSMUST00000158272 | 134 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24225-201 | ENSMUST00000158825 | 98 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm17119-201 | ENSMUST00000163943 | 280 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24713-201 | ENSMUST00000178850 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm21978-201 | ENSMUST00000179696 | 377 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm25448-201 | ENSMUST00000180065 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm23523-201 | ENSMUST00000180190 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm24518-201 | ENSMUST00000180275 | 94 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm27999-201 | ENSMUST00000183539 | 193 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Bsph2-ps-201 | ENSMUST00000183795 | 241 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm28418-201 | ENSMUST00000186179 | 423 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm29009-201 | ENSMUST00000186340 | 496 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm29350-201 | ENSMUST00000189141 | 541 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr289-ps1-201 | ENSMUST00000192834 | 369 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm37732-201 | ENSMUST00000194377 | 316 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Vamp4-208 | ENSMUST00000194810 | 600 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm38167-201 | ENSMUST00000195704 | 1178 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm43083-201 | ENSMUST00000199594 | 476 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm36406-202 | ENSMUST00000203761 | 551 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm44472-201 | ENSMUST00000204922 | 943 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm45252-201 | ENSMUST00000211579 | 397 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr1035-ps1-202 | ENSMUST00000213364 | 288 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC159232.1-201 | ENSMUST00000222297 | 580 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | CT025579.1-201 | ENSMUST00000223779 | 366 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr394-201 | ENSMUST00000071478 | 933 nt | APPRIS P1 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr339-202 | ENSMUST00000216645 | 4867 nt | APPRIS P1 TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr1437-202 | ENSMUST00000207241 | 3751 nt | APPRIS P1 TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm45178-201 | ENSMUST00000207744 | 4110 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Adgrg4-204 | ENSMUST00000153784 | 9329 nt | APPRIS P5 TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Vmn1r75-206 | ENSMUST00000228463 | 6508 nt | APPRIS P2 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm14868-201 | ENSMUST00000117840 | 216 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm13862-201 | ENSMUST00000121220 | 197 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm12872-201 | ENSMUST00000121835 | 320 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Rpl30-ps9-201 | ENSMUST00000122265 | 345 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm22561-201 | ENSMUST00000157331 | 84 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm25339-201 | ENSMUST00000157458 | 232 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm8580-201 | ENSMUST00000160295 | 464 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Vmn1r-ps31-201 | ENSMUST00000174112 | 238 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm25476-201 | ENSMUST00000175125 | 185 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm21171-201 | ENSMUST00000180048 | 673 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm28900-201 | ENSMUST00000185232 | 156 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Ighv1-6-201 | ENSMUST00000193849 | 293 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm42594-201 | ENSMUST00000199511 | 246 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Olfr499-ps1-201 | ENSMUST00000208811 | 930 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm7675-201 | ENSMUST00000208828 | 686 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm31294-201 | ENSMUST00000211216 | 138 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Nat1-202 | ENSMUST00000212171 | 1208 nt | APPRIS ALT1 TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm45815-201 | ENSMUST00000220241 | 146 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | AC126554.1-201 | ENSMUST00000222161 | 271 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Defb21-201 | ENSMUST00000070722 | 427 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Snord68-201 | ENSMUST00000082516 | 86 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | Gm22365-201 | ENSMUST00000093750 | 117 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa4 | P06798 | N4bp2l2-201 | ENSMUST00000118316 | 8982 nt | APPRIS P1 TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Gm26147-201 | ENSMUST00000104479 | 114 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Gm26342-201 | ENSMUST00000104557 | 129 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Gm12765-201 | ENSMUST00000117273 | 615 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Gm12871-201 | ENSMUST00000118758 | 438 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Olfr1169-ps1-201 | ENSMUST00000121437 | 233 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Olfr1172-ps1-201 | ENSMUST00000121530 | 192 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| Hoxa4 | P06798 | Gm12443-201 | ENSMUST00000122308 | 323 nt | BASIC | 2.46 | □□□□□ -2.02 | | |