Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm17204-201ENSMUST00000167936 478 ntBASIC0.42□□□□□ -2.34
Col6a3E9PWQ3 Gm27582-201ENSMUST00000184084 126 ntBASIC0.42□□□□□ -2.34
Col6a3E9PWQ3 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.42□□□□□ -2.34
Col6a3E9PWQ3 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.42□□□□□ -2.34
Col6a3E9PWQ3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm2930-201ENSMUST00000170403 474 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm9613-201ENSMUST00000171662 196 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm22566-201ENSMUST00000175541 85 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm26701-201ENSMUST00000181571 234 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm23886-201ENSMUST00000122684 313 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm22607-201ENSMUST00000158291 105 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Snora16a-202ENSMUST00000196061 137 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm43286-201ENSMUST00000197420 424 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm45658-201ENSMUST00000209197 580 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Gm22507-201ENSMUST00000082773 160 ntBASIC0.41□□□□□ -2.34
Col6a3E9PWQ3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm13602-201ENSMUST00000122405 493 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm25060-201ENSMUST00000157374 130 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm22114-201ENSMUST00000177756 107 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm27762-201ENSMUST00000183417 109 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm22061-201ENSMUST00000082557 107 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm23690-201ENSMUST00000083036 94 ntBASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
Col6a3E9PWQ3 Gm11284-201ENSMUST00000121910 1887 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm12797-201ENSMUST00000118645 273 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm24079-201ENSMUST00000104352 132 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Mir290a-201ENSMUST00000104627 83 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm5287-201ENSMUST00000120666 598 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm14069-201ENSMUST00000120815 229 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm13440-201ENSMUST00000121665 496 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm22315-201ENSMUST00000158010 143 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm22158-201ENSMUST00000158411 126 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm45273-201ENSMUST00000211559 281 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.4□□□□□ -2.35
Col6a3E9PWQ3 Gm15110-201ENSMUST00000117545 881 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm15213-201ENSMUST00000122098 216 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm24777-201ENSMUST00000157644 107 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm22995-201ENSMUST00000179670 107 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm45789-201ENSMUST00000213038 364 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm24203-201ENSMUST00000082949 114 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm24535-201ENSMUST00000083140 107 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm23520-201ENSMUST00000093736 107 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm36638-201ENSMUST00000193295 400 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm19540-201ENSMUST00000221843 810 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 AC149294.9-201ENSMUST00000227256 164 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm23375-201ENSMUST00000175407 83 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm37399-201ENSMUST00000195224 416 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm43708-201ENSMUST00000198857 961 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm23850-201ENSMUST00000083830 169 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.39□□□□□ -2.35
Col6a3E9PWQ3 Gm22658-201ENSMUST00000104196 155 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Scarna8-201ENSMUST00000158333 131 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm44348-201ENSMUST00000200165 122 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm26186-201ENSMUST00000157689 125 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm22768-201ENSMUST00000158366 153 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm29641-201ENSMUST00000188955 259 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm22685-201ENSMUST00000082848 106 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm25578-201ENSMUST00000083406 104 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.38□□□□□ -2.35
Col6a3E9PWQ3 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm13725-201ENSMUST00000122139 207 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm18113-201ENSMUST00000220630 303 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm11784-201ENSMUST00000118568 474 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm26352-201ENSMUST00000158223 125 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm25368-201ENSMUST00000158847 131 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm27365-201ENSMUST00000184041 177 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm28872-201ENSMUST00000191518 158 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm36966-201ENSMUST00000192217 413 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm18956-201ENSMUST00000192857 480 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm44794-201ENSMUST00000206550 411 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 Gm22016-201ENSMUST00000158793 114 ntBASIC0.37□□□□□ -2.35
Col6a3E9PWQ3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms