Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm6651-201ENSMUST00000189471 271 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm45439-201ENSMUST00000211723 359 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm18188-201ENSMUST00000219386 478 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm24622-201ENSMUST00000082619 162 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mir193a-201ENSMUST00000083461 66 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm26074-201ENSMUST00000104063 129 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm23836-201ENSMUST00000104434 129 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm13131-201ENSMUST00000122228 321 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22338-201ENSMUST00000157715 129 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm24056-201ENSMUST00000158617 146 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm21815-201ENSMUST00000178213 664 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm28843-201ENSMUST00000189198 678 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm29167-201ENSMUST00000190024 377 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm29546-201ENSMUST00000191171 678 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm37568-201ENSMUST00000191755 364 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm36966-201ENSMUST00000192217 413 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm45387-201ENSMUST00000209792 632 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC122924.2-201ENSMUST00000220799 298 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm24152-201ENSMUST00000082764 163 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm13406-201ENSMUST00000121991 256 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22073-201ENSMUST00000122668 189 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25220-201ENSMUST00000157546 95 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25185-201ENSMUST00000157754 96 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm37771-201ENSMUST00000193121 265 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm37801-201ENSMUST00000194754 274 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm44830-201ENSMUST00000207667 584 ntBASIC0.29□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25168-201ENSMUST00000104189 132 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm15223-201ENSMUST00000120989 826 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm23381-201ENSMUST00000157676 94 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm24808-201ENSMUST00000157993 118 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25412-201ENSMUST00000180258 107 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm38060-201ENSMUST00000194822 464 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr1285-201ENSMUST00000208523 903 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.28□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm14879-201ENSMUST00000117308 507 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Mir6419-201ENSMUST00000184784 113 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm19232-201ENSMUST00000211621 652 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Mir429-201ENSMUST00000083493 83 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.27□□□□□ -2.37
Trav4-3A0A0B4J1K1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms