Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm23645-201ENSMUST00000083228 108 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm23741-201ENSMUST00000097237 171 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm12351-201ENSMUST00000118727 292 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm14359-201ENSMUST00000118883 424 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm14554-201ENSMUST00000119548 661 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm15274-201ENSMUST00000131442 291 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm21979-201ENSMUST00000139887 291 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm9498-201ENSMUST00000140849 291 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm14368-201ENSMUST00000145305 415 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm15259-201ENSMUST00000151262 291 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm22559-201ENSMUST00000157329 134 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm24262-201ENSMUST00000157431 144 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm23181-201ENSMUST00000158685 110 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Snord87-201ENSMUST00000175437 87 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm22862-201ENSMUST00000178593 121 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm26177-201ENSMUST00000178683 107 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Mir6406-201ENSMUST00000183592 120 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm45150-201ENSMUST00000206051 467 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm9377-201ENSMUST00000207227 623 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm44656-201ENSMUST00000208428 490 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm45654-201ENSMUST00000210980 123 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm45240-201ENSMUST00000211437 674 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.05□□□□□ -2.24
Trav6-6A0A075B603 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm6587-201ENSMUST00000120219 613 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm15115-201ENSMUST00000121145 264 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm24836-201ENSMUST00000122609 108 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm22764-201ENSMUST00000158370 92 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm2855-201ENSMUST00000166765 456 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm24333-201ENSMUST00000175101 84 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm38044-201ENSMUST00000192964 487 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm38154-201ENSMUST00000195444 340 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm45387-201ENSMUST00000209792 632 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm46994-201ENSMUST00000221523 219 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm5955-201ENSMUST00000222712 219 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Mir29c-201ENSMUST00000083614 88 ntBASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trav6-6A0A075B603 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm23950-201ENSMUST00000104026 129 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm12016-201ENSMUST00000119079 681 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm15878-201ENSMUST00000127561 306 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm22082-201ENSMUST00000157587 161 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm6395-201ENSMUST00000167639 691 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm25243-201ENSMUST00000174912 207 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Mir3086-201ENSMUST00000175072 87 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Mir6335-201ENSMUST00000184081 98 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm18433-201ENSMUST00000192747 197 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm42958-201ENSMUST00000197595 318 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm44554-201ENSMUST00000208738 147 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm24610-201ENSMUST00000083270 109 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm16261-201ENSMUST00000096813 205 ntBASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6-6A0A075B603 Gm15714-201ENSMUST00000117168 250 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm13378-201ENSMUST00000117483 336 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm14852-201ENSMUST00000120065 647 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm15177-201ENSMUST00000120491 577 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm14530-201ENSMUST00000122391 333 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm22389-201ENSMUST00000158193 301 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm2966-201ENSMUST00000166052 481 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm25035-201ENSMUST00000175414 77 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm23648-201ENSMUST00000180301 107 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm29657-201ENSMUST00000189807 342 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm29950-201ENSMUST00000195273 237 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm8747-201ENSMUST00000195392 751 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.02□□□□□ -2.25
Trav6-6A0A075B603 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms