Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msh5Q9QUM7 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Msh5Q9QUM7 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm14973-201ENSMUST00000117248 255 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm25824-201ENSMUST00000157092 121 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Mir6343-201ENSMUST00000183584 84 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm9442-201ENSMUST00000194242 319 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm37791-201ENSMUST00000195081 286 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 AC135292.1-201ENSMUST00000227665 204 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm23507-201ENSMUST00000083078 107 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Mir338-201ENSMUST00000083666 98 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm37298-201ENSMUST00000193770 3868 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Msh5Q9QUM7 Gm45235-201ENSMUST00000208016 4465 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Msh5Q9QUM7 BC022960-201ENSMUST00000119987 1815 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Mir547-201ENSMUST00000102051 78 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Mir1188-201ENSMUST00000116756 120 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm12379-201ENSMUST00000119607 391 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm12443-201ENSMUST00000122308 323 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 n-R5s216-201ENSMUST00000122755 112 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5□□□□□ -1.61
Msh5Q9QUM7 Mir1951-201ENSMUST00000157981 89 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 BX530055.1-201ENSMUST00000197285 122 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm44184-201ENSMUST00000204290 132 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5□□□□□ -1.61
Msh5Q9QUM7 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm23514-201ENSMUST00000082827 130 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 n-R5s3-201ENSMUST00000083879 112 ntBASIC5□□□□□ -1.61
Msh5Q9QUM7 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Msh5Q9QUM7 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Msh5Q9QUM7 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm22483-201ENSMUST00000157986 274 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm25978-201ENSMUST00000158698 90 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm10292-201ENSMUST00000183142 581 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Mir7020-201ENSMUST00000183787 70 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm8274-201ENSMUST00000219820 463 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Gm20368-201ENSMUST00000220716 301 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Mir99a-201ENSMUST00000083596 65 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC4.99□□□□□ -1.61
Msh5Q9QUM7 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Msh5Q9QUM7 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Snord100-201ENSMUST00000116836 74 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm25572-201ENSMUST00000157527 172 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm22725-201ENSMUST00000158092 110 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm28000-201ENSMUST00000184380 85 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm37377-201ENSMUST00000191733 304 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm43155-201ENSMUST00000202661 494 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm45660-201ENSMUST00000210267 151 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Mir504-201ENSMUST00000093602 79 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Msh5Q9QUM7 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.98□□□□□ -1.61
Msh5Q9QUM7 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms