Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm23137-201ENSMUST00000157559 107 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm24438-201ENSMUST00000157893 115 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm17946-201ENSMUST00000186856 538 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm37579-201ENSMUST00000194291 142 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm22740-201ENSMUST00000083439 109 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm14694-201ENSMUST00000121856 282 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm23000-201ENSMUST00000157083 139 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm24168-201ENSMUST00000178825 107 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm21726-201ENSMUST00000179654 392 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm23614-201ENSMUST00000082598 107 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Snord104-201ENSMUST00000083192 70 ntBASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.2□□□□□ -2.06
Scn5aQ9JJV9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Gm14823-201ENSMUST00000117698 238 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Gm27957-201ENSMUST00000184054 127 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Scn5aQ9JJV9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm14785-201ENSMUST00000120185 539 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm24784-201ENSMUST00000157640 62 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm17538-201ENSMUST00000168236 327 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm44726-201ENSMUST00000203427 217 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm15162-201ENSMUST00000119325 283 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm24911-201ENSMUST00000157292 136 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm22556-201ENSMUST00000157803 100 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm26406-201ENSMUST00000158503 124 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm22631-201ENSMUST00000179656 94 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm24638-201ENSMUST00000179807 132 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm27028-201ENSMUST00000182303 399 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm18341-201ENSMUST00000197538 622 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.18□□□□□ -2.06
Scn5aQ9JJV9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm22834-201ENSMUST00000102021 79 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm11352-201ENSMUST00000119264 517 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm14362-201ENSMUST00000121679 273 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm15254-201ENSMUST00000149567 273 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm25559-201ENSMUST00000157182 74 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm20794-201ENSMUST00000177626 628 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm26968-201ENSMUST00000182894 481 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm29413-201ENSMUST00000186019 880 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm29639-201ENSMUST00000188375 580 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm20885-201ENSMUST00000190192 654 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm36866-201ENSMUST00000193343 657 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm36047-201ENSMUST00000193659 657 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm20857-201ENSMUST00000194766 657 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm20858-201ENSMUST00000195459 657 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 Gm30638-201ENSMUST00000195570 656 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.17□□□□□ -2.06
Scn5aQ9JJV9 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms