Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm24984-201ENSMUST00000104454 133 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22496-201ENSMUST00000104493 88 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm14793-201ENSMUST00000118739 311 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm14989-201ENSMUST00000120497 207 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm2768-201ENSMUST00000121062 250 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm23538-201ENSMUST00000157535 101 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22535-201ENSMUST00000158174 119 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22765-201ENSMUST00000158371 128 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25175-201ENSMUST00000178712 79 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28666-201ENSMUST00000186649 274 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28412-201ENSMUST00000187243 177 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm19891-201ENSMUST00000189771 303 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44961-201ENSMUST00000207450 196 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm45101-201ENSMUST00000208327 232 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm45387-201ENSMUST00000209792 632 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc3Q9D6Y1 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Mir3096-201ENSMUST00000116685 71 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm7164-201ENSMUST00000117503 450 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15067-201ENSMUST00000119534 156 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm16428-201ENSMUST00000121193 723 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22186-201ENSMUST00000157822 122 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22665-201ENSMUST00000158720 275 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm26004-201ENSMUST00000158804 116 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22527-201ENSMUST00000158816 106 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25874-201ENSMUST00000178030 79 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Mir6376-201ENSMUST00000185149 131 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm43431-201ENSMUST00000198577 340 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44615-201ENSMUST00000206548 358 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44954-201ENSMUST00000208513 227 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm10298-201ENSMUST00000074801 265 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm23645-201ENSMUST00000083228 108 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm23741-201ENSMUST00000097237 171 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.66□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm11065-201ENSMUST00000111462 228 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14932-201ENSMUST00000117112 453 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm11845-201ENSMUST00000117886 327 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15312-201ENSMUST00000118827 271 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12044-201ENSMUST00000120335 213 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm25624-201ENSMUST00000157222 275 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm22843-201ENSMUST00000157710 134 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24056-201ENSMUST00000158617 146 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm2930-201ENSMUST00000170403 474 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24111-201ENSMUST00000175491 97 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm5900-201ENSMUST00000179862 375 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Gm22443-201ENSMUST00000082890 107 ntBASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24340-201ENSMUST00000104208 97 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm13355-201ENSMUST00000117996 317 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14899-201ENSMUST00000118673 548 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14359-201ENSMUST00000118883 424 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14360-201ENSMUST00000120670 393 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm9498-201ENSMUST00000140849 291 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14368-201ENSMUST00000145305 415 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm22716-201ENSMUST00000177596 107 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm37029-201ENSMUST00000195773 239 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm42647-201ENSMUST00000195939 459 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm44050-201ENSMUST00000204263 527 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm45386-201ENSMUST00000210194 218 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms