Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13432-201ENSMUST00000118861 241 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm25390-201ENSMUST00000157341 103 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm28020-201ENSMUST00000157739 67 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm22766-201ENSMUST00000158372 99 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm2862-201ENSMUST00000161524 328 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm27869-201ENSMUST00000184327 122 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Trbv6-201ENSMUST00000193743 276 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm43730-201ENSMUST00000199863 372 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Gm6842-201ENSMUST00000211361 390 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 Mir103-2-201ENSMUST00000083629 86 ntBASIC4.28□□□□□ -1.72
Clp1Q99LI9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
Clp1Q99LI9 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
Clp1Q99LI9 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm6897-201ENSMUST00000117714 138 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm14758-201ENSMUST00000119104 138 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm25269-201ENSMUST00000122601 104 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm2962-201ENSMUST00000159266 336 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm16326-201ENSMUST00000162843 414 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm27189-201ENSMUST00000184119 190 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm29104-201ENSMUST00000186304 222 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm18341-201ENSMUST00000197538 622 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.27□□□□□ -1.73
Clp1Q99LI9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Clp1Q99LI9 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm25765-201ENSMUST00000104100 132 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm12797-201ENSMUST00000118645 273 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm14687-201ENSMUST00000120206 363 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm11982-201ENSMUST00000121480 314 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm22968-201ENSMUST00000157955 118 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm22316-201ENSMUST00000158012 216 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm29668-201ENSMUST00000187802 315 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm45162-201ENSMUST00000209013 618 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm45245-201ENSMUST00000210082 376 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Clp1Q99LI9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC4.26□□□□□ -1.73
Clp1Q99LI9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Clp1Q99LI9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clp1Q99LI9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm24121-201ENSMUST00000102029 106 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm12443-201ENSMUST00000122308 323 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm25543-201ENSMUST00000122678 312 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm23168-201ENSMUST00000157156 143 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm25977-201ENSMUST00000158697 85 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm22531-201ENSMUST00000158819 140 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm43586-201ENSMUST00000195948 310 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm44594-201ENSMUST00000208982 407 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm3829-201ENSMUST00000222362 619 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm25930-201ENSMUST00000082785 107 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm25856-201ENSMUST00000082786 75 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm26327-201ENSMUST00000093724 111 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.25□□□□□ -1.73
Clp1Q99LI9 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.25□□□□□ -1.73
Clp1Q99LI9 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.24□□□□□ -1.73
Clp1Q99LI9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Clp1Q99LI9 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms