Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Gm23506-201ENSMUST00000083077 107 ntBASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Gm5670-201ENSMUST00000093546 372 ntBASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.61□□□□□ -2.15
Lsm1Q8VC85 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm25992-201ENSMUST00000102437 109 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm15211-201ENSMUST00000118932 528 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 AA413626-201ENSMUST00000121125 494 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm24836-201ENSMUST00000122609 108 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm6660-201ENSMUST00000179149 468 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm27878-201ENSMUST00000184000 106 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm38149-201ENSMUST00000191943 339 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm31520-201ENSMUST00000203048 733 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm45387-201ENSMUST00000209792 632 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Lsm1Q8VC85 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm15878-201ENSMUST00000127561 306 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm22227-201ENSMUST00000157356 259 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm22217-201ENSMUST00000157556 313 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm22315-201ENSMUST00000158010 143 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm22765-201ENSMUST00000158371 128 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm16584-201ENSMUST00000159267 189 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm22264-201ENSMUST00000178200 107 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Mir7679-201ENSMUST00000183379 63 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm29603-201ENSMUST00000186792 334 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm28453-203ENSMUST00000187041 189 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm38044-201ENSMUST00000192964 487 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm37319-201ENSMUST00000193500 636 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm45240-201ENSMUST00000211437 674 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Gm23042-201ENSMUST00000083866 101 ntBASIC1.59□□□□□ -2.15
Lsm1Q8VC85 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm13378-201ENSMUST00000117483 336 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm12016-201ENSMUST00000119079 681 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm25707-201ENSMUST00000175120 96 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm24137-201ENSMUST00000180055 79 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm25873-201ENSMUST00000180317 107 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm22391-201ENSMUST00000180356 79 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Mir6351-201ENSMUST00000183826 99 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm27248-201ENSMUST00000184004 166 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm38154-201ENSMUST00000195444 340 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm2676-201ENSMUST00000207279 606 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm23246-201ENSMUST00000083371 67 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.58□□□□□ -2.16
Lsm1Q8VC85 Mir669d-201ENSMUST00000104644 121 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm24262-201ENSMUST00000157431 144 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm24858-201ENSMUST00000158058 323 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm16162-201ENSMUST00000162296 297 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm17038-201ENSMUST00000166586 494 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Mir3086-201ENSMUST00000175072 87 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm46136-201ENSMUST00000214730 565 ntBASIC1.57□□□□□ -2.16
Lsm1Q8VC85 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Lsm1Q8VC85 Gm26396-201ENSMUST00000104093 132 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm23109-201ENSMUST00000116867 126 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm6444-201ENSMUST00000119611 458 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm23956-201ENSMUST00000157211 119 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm26181-201ENSMUST00000157687 106 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm26024-201ENSMUST00000158657 322 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm24174-201ENSMUST00000158933 111 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm3102-201ENSMUST00000164236 489 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Snord87-201ENSMUST00000175437 87 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Mir6335-201ENSMUST00000184081 98 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Mir6997-201ENSMUST00000184313 71 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm28383-201ENSMUST00000187563 139 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm29262-201ENSMUST00000190084 196 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.56□□□□□ -2.16
Lsm1Q8VC85 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.56□□□□□ -2.16
Lsm1Q8VC85 Mir29c-201ENSMUST00000083614 88 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms