Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24982-201ENSMUST00000104456 132 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm14811-201ENSMUST00000117070 117 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm14652-201ENSMUST00000118479 235 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm12871-201ENSMUST00000118758 438 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm14669-201ENSMUST00000118841 250 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm14240-201ENSMUST00000120353 546 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm23895-201ENSMUST00000158108 160 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Mir6401-201ENSMUST00000184499 109 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm28314-201ENSMUST00000191276 345 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm44322-201ENSMUST00000196830 115 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm43407-201ENSMUST00000199816 317 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm45616-201ENSMUST00000211711 319 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm18488-201ENSMUST00000215082 364 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm9068-201ENSMUST00000217393 455 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm24147-201ENSMUST00000082763 144 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm25792-201ENSMUST00000083289 100 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm25937-201ENSMUST00000083912 107 ntBASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc9Q8VC31 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.59□□□□□ -1.84
Ccdc9Q8VC31 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm23941-201ENSMUST00000101953 107 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm13046-201ENSMUST00000117391 501 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm13378-201ENSMUST00000117483 336 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm16358-201ENSMUST00000146046 210 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Mir5099-201ENSMUST00000175257 74 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Snora15-201ENSMUST00000177461 131 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm22307-201ENSMUST00000180019 107 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm17966-201ENSMUST00000193453 594 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm38076-201ENSMUST00000193889 450 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm44011-201ENSMUST00000203336 394 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm44419-201ENSMUST00000203338 229 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm43899-201ENSMUST00000203675 246 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Snora23-201ENSMUST00000082517 184 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm23736-201ENSMUST00000082553 75 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm22979-201ENSMUST00000082609 159 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm25126-201ENSMUST00000083343 102 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm23249-201ENSMUST00000083369 161 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.58□□□□□ -1.84
Ccdc9Q8VC31 Mir599-201ENSMUST00000102378 88 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm25879-201ENSMUST00000104330 107 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm22037-201ENSMUST00000157280 296 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm23326-201ENSMUST00000157419 105 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm23033-201ENSMUST00000157996 134 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm24618-201ENSMUST00000177718 94 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm23953-201ENSMUST00000178214 94 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm23660-201ENSMUST00000178362 79 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm24088-201ENSMUST00000179100 79 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm21893-201ENSMUST00000179119 397 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm26332-201ENSMUST00000179813 94 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm22863-201ENSMUST00000180265 94 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm27028-201ENSMUST00000182303 399 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm18854-201ENSMUST00000211196 329 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm46997-201ENSMUST00000222108 217 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Gm26439-201ENSMUST00000082592 106 ntBASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc9Q8VC31 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm23744-201ENSMUST00000104231 149 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm12771-201ENSMUST00000120246 135 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm12686-201ENSMUST00000120546 397 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm23865-201ENSMUST00000157723 97 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm24439-201ENSMUST00000157894 117 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm26005-201ENSMUST00000158802 134 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm22532-201ENSMUST00000158822 140 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm20698-201ENSMUST00000175657 233 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.56□□□□□ -1.84
Ccdc9Q8VC31 Gm4987-201ENSMUST00000078326 408 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms