Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm22265-201ENSMUST00000082947 116 ntBASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.5□□□□□ -2.17
Ccdc28aQ8CEI3 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm15452-201ENSMUST00000119877 240 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm24846-201ENSMUST00000158033 108 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Mir3092-201ENSMUST00000174954 96 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Mir6370-201ENSMUST00000183510 120 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm44615-201ENSMUST00000206548 358 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Mir320-201ENSMUST00000083594 82 ntBASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Ccdc28aQ8CEI3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm12656-201ENSMUST00000118149 577 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm14989-201ENSMUST00000120497 207 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm24601-201ENSMUST00000157970 143 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm21744-201ENSMUST00000178403 662 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm21726-201ENSMUST00000179654 392 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm21171-201ENSMUST00000180048 673 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29413-201ENSMUST00000186019 880 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm28700-201ENSMUST00000187614 579 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29639-201ENSMUST00000188375 580 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm28843-201ENSMUST00000189198 678 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29546-201ENSMUST00000191171 678 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm44324-201ENSMUST00000198517 135 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm45071-201ENSMUST00000205353 571 ntBASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.48□□□□□ -2.17
Ccdc28aQ8CEI3 Gm11065-201ENSMUST00000111462 228 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm11813-201ENSMUST00000118586 291 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm14359-201ENSMUST00000118883 424 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm12825-201ENSMUST00000120249 563 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm12045-201ENSMUST00000122122 573 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm24836-201ENSMUST00000122609 108 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm9498-201ENSMUST00000140849 291 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm14368-201ENSMUST00000145305 415 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm2855-201ENSMUST00000166765 456 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29231-201ENSMUST00000179850 319 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Mir7226-201ENSMUST00000184953 60 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm28412-201ENSMUST00000187243 177 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29600-201ENSMUST00000188687 377 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm38231-201ENSMUST00000192030 347 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm23370-202ENSMUST00000197008 129 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm44125-201ENSMUST00000203068 448 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm46136-201ENSMUST00000214730 565 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm6369-201ENSMUST00000069626 412 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc28aQ8CEI3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22227-201ENSMUST00000157356 259 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm24053-201ENSMUST00000158620 105 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23648-201ENSMUST00000180301 107 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm42807-201ENSMUST00000200141 329 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm9068-201ENSMUST00000217393 455 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm7984-201ENSMUST00000060640 538 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23506-201ENSMUST00000083077 107 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm25257-201ENSMUST00000083907 110 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.46□□□□□ -2.18
Ccdc28aQ8CEI3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.45□□□□□ -2.18
Ccdc28aQ8CEI3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms