Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Mir687-201ENSMUST00000102166 89 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm13153-201ENSMUST00000120969 637 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm15466-201ENSMUST00000122299 333 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm14389-201ENSMUST00000140453 241 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm26149-201ENSMUST00000157432 108 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Mir6916-201ENSMUST00000184514 63 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm32033-201ENSMUST00000193483 339 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm43284-201ENSMUST00000200103 253 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm44446-201ENSMUST00000204864 255 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.64□□□□□ -1.83
Vps53Q8CCB4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm23721-201ENSMUST00000083005 107 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps53Q8CCB4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Mir1198-201ENSMUST00000116995 121 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm12238-201ENSMUST00000127764 124 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm22722-201ENSMUST00000157467 132 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm22833-201ENSMUST00000158292 132 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm22766-201ENSMUST00000158372 99 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm26215-201ENSMUST00000158584 139 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm24552-201ENSMUST00000158646 103 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm23402-201ENSMUST00000178130 107 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm27783-201ENSMUST00000183534 105 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm27410-201ENSMUST00000183851 115 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm45513-201ENSMUST00000210228 376 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Mir21a-201ENSMUST00000083521 92 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Vps53Q8CCB4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm24068-201ENSMUST00000104513 132 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm22098-201ENSMUST00000157930 85 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm24264-201ENSMUST00000179835 94 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Mir6338-201ENSMUST00000183389 109 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm37029-201ENSMUST00000195773 239 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Mir3970-201ENSMUST00000199287 90 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm44223-201ENSMUST00000204854 114 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.62□□□□□ -1.83
Vps53Q8CCB4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm25943-201ENSMUST00000103791 90 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm22939-201ENSMUST00000103958 131 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm13761-201ENSMUST00000117238 807 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm15844-201ENSMUST00000118016 576 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm12876-201ENSMUST00000120975 408 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm14841-201ENSMUST00000121067 758 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm22026-201ENSMUST00000122735 281 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm3370-201ENSMUST00000171785 500 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm26501-201ENSMUST00000178307 107 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm25285-201ENSMUST00000178951 90 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm22951-201ENSMUST00000179471 107 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir6383-201ENSMUST00000184545 116 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm29429-201ENSMUST00000187071 121 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Mir7227-201ENSMUST00000200408 59 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm44655-201ENSMUST00000207768 423 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Gm18453-201ENSMUST00000208000 626 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.61□□□□□ -1.83
Vps53Q8CCB4 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms