Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm26500-201ENSMUST00000101867 106 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm12071-201ENSMUST00000121968 469 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm25390-201ENSMUST00000157341 103 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm27585-201ENSMUST00000183717 199 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm44657-201ENSMUST00000208568 450 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.29□□□□□ -1.72
Trim56Q80VI1 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm12793-201ENSMUST00000119268 292 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm23219-201ENSMUST00000158123 87 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm37431-201ENSMUST00000195102 111 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm43651-201ENSMUST00000199796 439 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm44355-201ENSMUST00000200417 104 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim56Q80VI1 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim56Q80VI1 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm22868-201ENSMUST00000083955 164 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.28□□□□□ -1.72
Trim56Q80VI1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim56Q80VI1 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Trim56Q80VI1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gm14770-201ENSMUST00000122197 312 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gm25860-201ENSMUST00000158252 126 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gm28453-203ENSMUST00000187041 189 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Mir7682-201ENSMUST00000198467 58 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 Gm22247-201ENSMUST00000082476 131 ntBASIC4.27□□□□□ -1.73
Trim56Q80VI1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim56Q80VI1 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm6897-201ENSMUST00000117714 138 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm14758-201ENSMUST00000119104 138 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm12512-201ENSMUST00000119620 217 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm13687-201ENSMUST00000119857 282 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm11819-201ENSMUST00000122192 372 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm24594-201ENSMUST00000122502 99 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm26001-201ENSMUST00000157989 103 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm23666-201ENSMUST00000158053 116 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm26028-201ENSMUST00000158660 294 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm24799-201ENSMUST00000178431 79 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm27540-201ENSMUST00000184950 187 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm37698-201ENSMUST00000192605 463 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm37361-201ENSMUST00000194345 132 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Gm24948-201ENSMUST00000082866 207 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim56Q80VI1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.26□□□□□ -1.73
Trim56Q80VI1 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim56Q80VI1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim56Q80VI1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25764-201ENSMUST00000104092 134 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm24282-201ENSMUST00000104232 66 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25391-201ENSMUST00000157342 134 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25425-201ENSMUST00000157611 96 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm23123-201ENSMUST00000157648 144 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25664-201ENSMUST00000157697 107 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm24727-201ENSMUST00000158231 144 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25834-201ENSMUST00000158916 101 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm27952-201ENSMUST00000184748 105 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm44887-201ENSMUST00000208980 178 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms