Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24116-201ENSMUST00000103975 107 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm12173-201ENSMUST00000117622 273 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm13419-201ENSMUST00000121711 271 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22501-201ENSMUST00000158981 127 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm36964-201ENSMUST00000191876 198 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm7182-201ENSMUST00000193351 732 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Mir465d-201ENSMUST00000196314 58 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm43955-201ENSMUST00000204332 142 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm45539-201ENSMUST00000210313 428 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25930-201ENSMUST00000082785 107 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24611-201ENSMUST00000083272 107 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Mir146-201ENSMUST00000083667 65 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Gm26314-201ENSMUST00000083891 107 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.04□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24788-201ENSMUST00000104283 156 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm13478-201ENSMUST00000118312 413 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm12902-201ENSMUST00000118389 322 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14782-201ENSMUST00000120151 195 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14551-201ENSMUST00000120802 256 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24015-201ENSMUST00000157725 232 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm26036-201ENSMUST00000158149 144 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm16162-201ENSMUST00000162296 297 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm17166-201ENSMUST00000172006 431 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37417-201ENSMUST00000195257 454 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37796-201ENSMUST00000195327 134 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm44349-201ENSMUST00000197048 123 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm10351-201ENSMUST00000087694 125 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.03□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.03□□□□□ -1.77
Sh3rf1Q69ZI1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23063-201ENSMUST00000102350 93 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23651-201ENSMUST00000116755 120 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm11874-201ENSMUST00000117437 130 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25220-201ENSMUST00000157546 95 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23215-201ENSMUST00000178153 121 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm27695-201ENSMUST00000184301 91 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm27477-201ENSMUST00000184649 143 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm29704-201ENSMUST00000196011 253 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Mir721-201ENSMUST00000200230 88 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm8274-201ENSMUST00000219820 463 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25800-201ENSMUST00000082636 134 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23039-201ENSMUST00000083870 161 ntBASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sh3rf1Q69ZI1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm13567-201ENSMUST00000118026 247 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm14845-201ENSMUST00000121259 306 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25985-201ENSMUST00000122677 107 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23231-201ENSMUST00000157299 104 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm25908-201ENSMUST00000157624 98 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm23782-201ENSMUST00000157939 120 ntBASIC4.01□□□□□ -1.77
Sh3rf1Q69ZI1 Gm22531-201ENSMUST00000158819 140 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms