Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm27410-201ENSMUST00000183851 115 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm21673-201ENSMUST00000186640 436 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm21135-201ENSMUST00000189023 436 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm29140-201ENSMUST00000190187 476 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm43407-201ENSMUST00000199816 317 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim28Q62318 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm18921-201ENSMUST00000221798 366 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm5670-201ENSMUST00000093546 372 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim28Q62318 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim28Q62318 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim28Q62318 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim28Q62318 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim28Q62318 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim28Q62318 Gm7853-201ENSMUST00000100708 478 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm13153-201ENSMUST00000120969 637 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm24784-201ENSMUST00000157640 62 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm24409-201ENSMUST00000157881 152 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm24191-201ENSMUST00000157977 122 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm22433-201ENSMUST00000158550 142 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm17187-201ENSMUST00000164622 410 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm20630-201ENSMUST00000177387 551 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Mir5123-201ENSMUST00000177794 83 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm26928-201ENSMUST00000182674 572 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm29227-201ENSMUST00000187139 315 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm29034-201ENSMUST00000188099 315 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm37129-201ENSMUST00000195791 315 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim28Q62318 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Gm22245-201ENSMUST00000082479 103 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim28Q62318 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Trim28Q62318 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim28Q62318 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim28Q62318 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.98□□□□□ -1.77
Trim28Q62318 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim28Q62318 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm24096-201ENSMUST00000103905 110 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm24120-201ENSMUST00000103978 129 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm11429-201ENSMUST00000119089 144 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm13239-201ENSMUST00000119920 637 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm15112-201ENSMUST00000120152 860 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim28Q62318 Gm24060-201ENSMUST00000157494 95 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm16569-201ENSMUST00000160526 314 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim28Q62318 Gm23402-201ENSMUST00000178130 107 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm27648-201ENSMUST00000184315 107 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm38356-201ENSMUST00000194313 408 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm44076-201ENSMUST00000203072 520 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim28Q62318 Gm45207-201ENSMUST00000207469 145 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Gm23721-201ENSMUST00000083005 107 ntBASIC3.97□□□□□ -1.77
Trim28Q62318 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Trim28Q62318 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim28Q62318 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim28Q62318 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim28Q62318 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.96□□□□□ -1.77
Trim28Q62318 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Trim28Q62318 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm11367-201ENSMUST00000117802 120 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm26278-201ENSMUST00000157098 132 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm22435-201ENSMUST00000158552 128 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm16232-201ENSMUST00000162856 167 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm3027-201ENSMUST00000167579 451 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm3104-201ENSMUST00000171004 473 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm24811-201ENSMUST00000175313 100 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm22114-201ENSMUST00000177756 107 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm26189-201ENSMUST00000179879 107 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm44481-201ENSMUST00000197288 84 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm44339-201ENSMUST00000200598 84 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm45119-201ENSMUST00000207612 199 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim28Q62318 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.96□□□□□ -1.78
Trim28Q62318 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim28Q62318 Snord98-201ENSMUST00000116819 65 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm15213-201ENSMUST00000122098 216 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm6374-201ENSMUST00000159051 788 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim28Q62318 Gm25749-201ENSMUST00000175485 111 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim28Q62318 Gm24713-201ENSMUST00000178850 107 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm25448-201ENSMUST00000180065 107 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm37568-201ENSMUST00000191755 364 ntBASIC3.95□□□□□ -1.78
Trim28Q62318 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim28Q62318 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim28Q62318 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms