Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm22929-201ENSMUST00000175517 107 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm25874-201ENSMUST00000178030 79 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm27520-201ENSMUST00000184872 81 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm29184-201ENSMUST00000190038 334 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Mir703-201ENSMUST00000197105 109 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm46103-201ENSMUST00000217614 341 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm35558-202ENSMUST00000221819 499 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Mdga2-203ENSMUST00000113942 423 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm25637-201ENSMUST00000157529 107 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm27676-201ENSMUST00000183669 61 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm43739-201ENSMUST00000198294 307 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm8041-201ENSMUST00000199755 616 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm43026-201ENSMUST00000202972 325 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm44818-201ENSMUST00000206608 358 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Snord14d-201ENSMUST00000083424 86 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Mir208a-201ENSMUST00000083498 83 ntBASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col27a1Q5QNQ9 Gm14238-201ENSMUST00000120227 323 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm14770-201ENSMUST00000122197 312 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm23032-201ENSMUST00000157995 107 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28838-201ENSMUST00000186338 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm29635-201ENSMUST00000187221 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm29026-201ENSMUST00000187787 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28797-201ENSMUST00000188543 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28855-201ENSMUST00000188680 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm29641-201ENSMUST00000188955 259 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28705-201ENSMUST00000189548 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28939-201ENSMUST00000190351 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm28223-201ENSMUST00000190469 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm29092-201ENSMUST00000190768 315 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm33354-201ENSMUST00000195448 906 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm42834-201ENSMUST00000196845 256 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm44254-201ENSMUST00000204184 322 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm19326-201ENSMUST00000219818 326 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm24254-201ENSMUST00000083702 104 ntBASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col27a1Q5QNQ9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm24863-201ENSMUST00000179499 107 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm36984-201ENSMUST00000192770 235 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm38213-201ENSMUST00000193203 173 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm23140-201ENSMUST00000082487 107 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm14670-201ENSMUST00000117327 337 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm14915-201ENSMUST00000120747 204 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm23469-201ENSMUST00000157131 104 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms