Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm26414-201ENSMUST00000157674 269 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm22843-201ENSMUST00000157710 134 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm26024-201ENSMUST00000158657 322 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm6660-201ENSMUST00000179149 468 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm22527-201ENSMUST00000158816 106 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm17154-201ENSMUST00000165748 431 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Mir6352-201ENSMUST00000184495 116 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Mir8090-201ENSMUST00000185078 136 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm28283-201ENSMUST00000185509 178 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm44182-201ENSMUST00000204052 115 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Mir300-201ENSMUST00000083485 79 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.85□□□□□ -2.11
Upf3bQ3ULL6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm25563-201ENSMUST00000104603 74 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm14709-201ENSMUST00000121225 304 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm25279-201ENSMUST00000122608 133 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm23956-201ENSMUST00000157211 119 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm22793-201ENSMUST00000157227 330 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm23034-201ENSMUST00000158001 147 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm25658-201ENSMUST00000158472 128 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm25836-201ENSMUST00000158918 123 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Mir7026-201ENSMUST00000184384 67 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm29429-201ENSMUST00000187071 121 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm44024-201ENSMUST00000203008 476 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Olfr575-201ENSMUST00000084812 957 ntBASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Upf3bQ3ULL6 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Upf3bQ3ULL6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm14774-201ENSMUST00000117857 536 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm11352-201ENSMUST00000119264 517 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm13588-201ENSMUST00000120026 135 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm14852-201ENSMUST00000120065 647 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm3221-201ENSMUST00000164869 440 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm43431-201ENSMUST00000198577 340 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm26922-201ENSMUST00000082687 72 ntBASIC1.83□□□□□ -2.12
Upf3bQ3ULL6 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm25088-201ENSMUST00000101803 79 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm12646-201ENSMUST00000119144 238 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm16412-201ENSMUST00000121602 273 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm24839-201ENSMUST00000122602 107 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm24177-201ENSMUST00000158927 131 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm10177-202ENSMUST00000161698 207 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm44392-201ENSMUST00000196758 115 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm18691-201ENSMUST00000203593 872 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm18617-201ENSMUST00000222311 259 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Mir301-201ENSMUST00000083655 86 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm23042-201ENSMUST00000083866 101 ntBASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Upf3bQ3ULL6 Gm15167-201ENSMUST00000121997 187 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm25365-201ENSMUST00000158852 121 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm9892-201ENSMUST00000182415 992 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm38213-201ENSMUST00000193203 173 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Mir703-201ENSMUST00000197105 109 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm17911-201ENSMUST00000210806 877 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm45654-201ENSMUST00000210980 123 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 Gm29809-201ENSMUST00000218423 493 ntBASIC1.81□□□□□ -2.12
Upf3bQ3ULL6 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms