Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm23578-201ENSMUST00000103943 104 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm8217-201ENSMUST00000119136 465 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm12042-201ENSMUST00000120479 301 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm13153-201ENSMUST00000120969 637 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm12155-201ENSMUST00000121267 160 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm12779-201ENSMUST00000121496 143 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm24936-201ENSMUST00000122598 247 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm26020-201ENSMUST00000122729 183 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm14298-201ENSMUST00000139032 237 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm16356-201ENSMUST00000143300 169 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm24909-201ENSMUST00000157290 280 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm25490-201ENSMUST00000158734 130 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm17119-201ENSMUST00000163943 280 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm7958-201ENSMUST00000178255 468 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm7950-201ENSMUST00000179633 468 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm26701-201ENSMUST00000181571 234 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm29104-201ENSMUST00000186304 222 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm37081-201ENSMUST00000192034 196 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm37290-201ENSMUST00000195775 339 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm35931-201ENSMUST00000203931 448 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm26446-201ENSMUST00000082455 103 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Gm25482-201ENSMUST00000083225 107 ntBASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col28a1Q2UY11 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col28a1Q2UY11 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col28a1Q2UY11 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col28a1Q2UY11 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm25407-201ENSMUST00000104102 134 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm14296-202ENSMUST00000108931 750 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm12782-201ENSMUST00000117519 727 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm14971-201ENSMUST00000117980 663 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm13876-201ENSMUST00000118451 261 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm24501-201ENSMUST00000158452 62 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm24168-201ENSMUST00000178825 107 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Mir7081-201ENSMUST00000184490 75 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm29227-201ENSMUST00000187139 315 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm29034-201ENSMUST00000188099 315 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm7837-201ENSMUST00000190873 412 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm37129-201ENSMUST00000195791 315 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm43704-201ENSMUST00000196164 496 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm42925-201ENSMUST00000197359 285 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm24316-201ENSMUST00000083041 107 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col28a1Q2UY11 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm14008-201ENSMUST00000120483 274 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm15213-201ENSMUST00000122098 216 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm4916-201ENSMUST00000126139 642 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm26101-201ENSMUST00000157246 105 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm23901-201ENSMUST00000157570 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm24584-201ENSMUST00000157972 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22532-201ENSMUST00000158822 140 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm17162-201ENSMUST00000168538 473 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm25956-201ENSMUST00000175115 217 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22910-201ENSMUST00000178568 132 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22259-201ENSMUST00000178926 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22286-201ENSMUST00000179708 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm18384-201ENSMUST00000195974 808 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm44322-201ENSMUST00000196830 115 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm34091-201ENSMUST00000200875 604 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm45815-201ENSMUST00000220241 146 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm22749-201ENSMUST00000082490 107 ntBASIC3.07□□□□□ -1.92
Col28a1Q2UY11 Gm24856-201ENSMUST00000082809 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms