Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a1Q04857 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a1Q04857 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm15896-201ENSMUST00000118045 440 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm11693-201ENSMUST00000119625 565 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm22321-201ENSMUST00000157152 104 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm22447-201ENSMUST00000158155 92 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm17159-201ENSMUST00000169043 482 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Mir6338-201ENSMUST00000183389 109 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Mir6938-201ENSMUST00000184173 63 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm37617-201ENSMUST00000194309 159 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm5002-201ENSMUST00000207145 223 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a1Q04857 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm23517-201ENSMUST00000082830 192 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Mir101b-201ENSMUST00000083622 97 ntBASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a1Q04857 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Col6a1Q04857 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a1Q04857 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm24172-201ENSMUST00000104127 117 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm15613-201ENSMUST00000118396 326 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm26414-201ENSMUST00000157674 269 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm22098-201ENSMUST00000157930 85 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm24392-201ENSMUST00000158136 103 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm22611-201ENSMUST00000158288 150 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm24667-201ENSMUST00000158938 103 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm22308-201ENSMUST00000177609 107 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm25024-201ENSMUST00000179667 104 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm7909-201ENSMUST00000182688 614 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm27645-201ENSMUST00000183348 77 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm27476-201ENSMUST00000183366 104 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Mir6914-201ENSMUST00000184999 69 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm43955-201ENSMUST00000204332 142 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm25081-201ENSMUST00000082534 108 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm26454-201ENSMUST00000082682 107 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.26□□□□□ -1.73
Col6a1Q04857 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a1Q04857 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a1Q04857 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a1Q04857 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm26500-201ENSMUST00000101867 106 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm25538-201ENSMUST00000101943 107 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Mir294-201ENSMUST00000104710 84 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm13714-201ENSMUST00000117313 221 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm13478-201ENSMUST00000118312 413 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm22654-201ENSMUST00000157874 105 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm16303-201ENSMUST00000161498 390 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm20651-201ENSMUST00000177219 329 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm27580-201ENSMUST00000183666 149 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm28591-201ENSMUST00000185259 183 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm5329-201ENSMUST00000186898 463 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm44481-201ENSMUST00000197288 84 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm44339-201ENSMUST00000200598 84 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm9712-201ENSMUST00000210842 311 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm6842-201ENSMUST00000211361 390 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a1Q04857 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a1Q04857 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a1Q04857 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.25□□□□□ -1.73
Col6a1Q04857 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a1Q04857 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a1Q04857 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.24□□□□□ -1.73
Col6a1Q04857 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a1Q04857 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a1Q04857 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col6a1Q04857 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm23063-201ENSMUST00000102350 93 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm24605-201ENSMUST00000104772 96 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm11065-201ENSMUST00000111462 228 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm15223-201ENSMUST00000120989 826 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm12617-201ENSMUST00000121268 381 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm23209-201ENSMUST00000158667 110 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm25162-201ENSMUST00000158906 159 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Gm24264-201ENSMUST00000179835 94 ntBASIC4.24□□□□□ -1.73
Col6a1Q04857 Mir6917-201ENSMUST00000184111 61 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms