Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Mir148b-201ENSMUST00000083626 97 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Mir137-201ENSMUST00000083635 73 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm26080-201ENSMUST00000104069 131 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm8217-201ENSMUST00000119136 465 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm23118-201ENSMUST00000122657 187 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm2020-201ENSMUST00000145242 579 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm22843-201ENSMUST00000157710 134 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm22611-201ENSMUST00000158288 150 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm8207-201ENSMUST00000171204 502 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Mir3066-201ENSMUST00000175296 83 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm28666-201ENSMUST00000186649 274 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm38044-201ENSMUST00000192964 487 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm44609-201ENSMUST00000207157 460 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm24151-201ENSMUST00000082758 141 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm23650-201ENSMUST00000083355 70 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm23247-201ENSMUST00000083373 107 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm25411-201ENSMUST00000083760 151 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Nkx3-1P97436 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.49□□□□□ -2.17
Nkx3-1P97436 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm22270-201ENSMUST00000104034 132 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm14868-201ENSMUST00000117840 216 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm14918-201ENSMUST00000118153 268 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm15223-201ENSMUST00000120989 826 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm22452-201ENSMUST00000122804 104 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm23538-201ENSMUST00000157535 101 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm24768-201ENSMUST00000158512 94 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm25051-201ENSMUST00000158602 249 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm23267-201ENSMUST00000178490 132 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm24897-201ENSMUST00000179033 107 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm23714-201ENSMUST00000179259 105 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm5900-201ENSMUST00000179862 375 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm37455-201ENSMUST00000191993 529 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm18964-201ENSMUST00000193013 563 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm37743-201ENSMUST00000194645 376 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm44472-201ENSMUST00000204922 943 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm44135-201ENSMUST00000205221 368 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm45232-201ENSMUST00000207811 162 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.48□□□□□ -2.17
Nkx3-1P97436 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Mir410-201ENSMUST00000083563 81 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm22578-201ENSMUST00000083730 107 ntBASIC1.48□□□□□ -2.17
Nkx3-1P97436 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Nkx3-1P97436 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Nkx3-1P97436 Mir3096-201ENSMUST00000116685 71 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm23317-201ENSMUST00000157999 129 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm9071-201ENSMUST00000165915 474 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm24086-201ENSMUST00000175171 98 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm25451-201ENSMUST00000177832 121 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm27511-201ENSMUST00000183502 127 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm37029-201ENSMUST00000195773 239 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm17991-201ENSMUST00000208139 297 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Gm22247-201ENSMUST00000082476 131 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 Mir301-201ENSMUST00000083655 86 ntBASIC1.47□□□□□ -2.17
Nkx3-1P97436 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Nkx3-1P97436 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Nkx3-1P97436 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Nkx3-1P97436 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Nkx3-1P97436 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.46□□□□□ -2.18
Nkx3-1P97436 Gm24907-201ENSMUST00000116932 128 ntBASIC1.46□□□□□ -2.18
Nkx3-1P97436 Gm14899-201ENSMUST00000118673 548 ntBASIC1.46□□□□□ -2.18
Nkx3-1P97436 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.46□□□□□ -2.18
Nkx3-1P97436 Gm22236-201ENSMUST00000157093 106 ntBASIC1.46□□□□□ -2.18
Nkx3-1P97436 Gm17377-201ENSMUST00000165184 207 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms