Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Sox1P53783 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sox1P53783 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Sox1P53783 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sox1P53783 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sox1P53783 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sox1P53783 Gm23609-201ENSMUST00000104542 127 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm24605-201ENSMUST00000104772 96 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.11□□□□□ -1.75
Sox1P53783 Gm23602-201ENSMUST00000157258 132 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm23586-201ENSMUST00000157657 123 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Mir3092-201ENSMUST00000174954 96 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm22908-201ENSMUST00000177620 110 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm27535-201ENSMUST00000183814 157 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm44922-201ENSMUST00000206690 90 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm44879-201ENSMUST00000207007 503 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Gm44657-201ENSMUST00000208568 450 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.11□□□□□ -1.75
Sox1P53783 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Sox1P53783 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.11□□□□□ -1.75
Sox1P53783 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sox1P53783 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Sox1P53783 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sox1P53783 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.11□□□□□ -1.75
Sox1P53783 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sox1P53783 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Sox1P53783 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Gm23472-201ENSMUST00000101806 191 ntBASIC4.1□□□□□ -1.75
Sox1P53783 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Gm23226-201ENSMUST00000116927 103 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm7618-201ENSMUST00000121643 171 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm22026-201ENSMUST00000122735 281 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm25599-201ENSMUST00000157816 103 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm24497-201ENSMUST00000177868 191 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm27470-201ENSMUST00000184070 210 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.1□□□□□ -1.75
Sox1P53783 Gm43193-201ENSMUST00000197732 441 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm6240-201ENSMUST00000208014 473 ntBASIC4.1□□□□□ -1.75
Sox1P53783 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.1□□□□□ -1.75
Sox1P53783 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.1□□□□□ -1.75
Sox1P53783 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm18441-201ENSMUST00000223539 617 ntBASIC4.1□□□□□ -1.75
Sox1P53783 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm23444-201ENSMUST00000082922 191 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Mir99a-201ENSMUST00000083596 65 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Gm26166-201ENSMUST00000083788 107 ntBASIC4.1□□□□□ -1.75
Sox1P53783 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Sox1P53783 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.1□□□□□ -1.75
Sox1P53783 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Sox1P53783 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sox1P53783 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Sox1P53783 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sox1P53783 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Sox1P53783 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sox1P53783 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sox1P53783 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Sox1P53783 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Sox1P53783 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Sox1P53783 Gm23697-201ENSMUST00000103897 110 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm24282-201ENSMUST00000104232 66 ntBASIC4.09□□□□□ -1.75
Sox1P53783 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Sox1P53783 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm13992-201ENSMUST00000120558 156 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm14922-201ENSMUST00000121131 163 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm23466-201ENSMUST00000157133 106 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Mir1942-201ENSMUST00000157274 63 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm23121-201ENSMUST00000157653 173 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm24690-201ENSMUST00000157759 97 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm44594-201ENSMUST00000208982 407 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.09□□□□□ -1.75
Sox1P53783 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Sox1P53783 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.09□□□□□ -1.75
Sox1P53783 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm24533-201ENSMUST00000083138 196 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Gm22828-201ENSMUST00000083768 107 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.09□□□□□ -1.75
Sox1P53783 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
Sox1P53783 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Sox1P53783 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Sox1P53783 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms