Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm24839-201ENSMUST00000122602 107 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm6265-201ENSMUST00000149263 231 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm22534-201ENSMUST00000158173 104 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm24729-201ENSMUST00000158225 137 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm23047-201ENSMUST00000177661 94 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm27527-201ENSMUST00000183903 99 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm27694-201ENSMUST00000184740 86 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm27700-201ENSMUST00000185003 81 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm28408-201ENSMUST00000191557 463 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.44□□□□□ -2.02
Nkx2-1P50220 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm43746-201ENSMUST00000200028 317 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Nkx2-1P50220 Snora23-201ENSMUST00000082517 184 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm24533-201ENSMUST00000083138 196 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Mir184-201ENSMUST00000083662 69 ntBASIC2.44□□□□□ -2.02
Nkx2-1P50220 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm24683-201ENSMUST00000104840 88 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm14558-201ENSMUST00000117458 381 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm7164-201ENSMUST00000117503 450 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm12235-201ENSMUST00000118596 170 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm8260-201ENSMUST00000119230 353 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm22791-201ENSMUST00000157232 145 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm23332-201ENSMUST00000157424 275 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm22336-201ENSMUST00000157719 107 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm9071-201ENSMUST00000165915 474 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm5967-201ENSMUST00000172723 494 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm21893-201ENSMUST00000179119 397 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm27893-201ENSMUST00000184408 194 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm27385-201ENSMUST00000184747 104 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm29104-201ENSMUST00000186304 222 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm6801-201ENSMUST00000190697 339 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm44161-201ENSMUST00000203532 253 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm23627-201ENSMUST00000082459 107 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm22502-201ENSMUST00000082488 107 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm24149-201ENSMUST00000082757 107 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Gm24037-201ENSMUST00000082871 180 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.43□□□□□ -2.02
Nkx2-1P50220 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Nkx2-1P50220 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm22590-201ENSMUST00000104247 128 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm25781-201ENSMUST00000122527 84 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm25292-201ENSMUST00000122797 322 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm24911-201ENSMUST00000157292 136 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm24419-201ENSMUST00000157875 332 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm24499-201ENSMUST00000158446 104 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm24736-201ENSMUST00000158862 130 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm22853-201ENSMUST00000174974 131 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm25470-201ENSMUST00000175576 111 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm25314-201ENSMUST00000178810 79 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm6660-201ENSMUST00000179149 468 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm28399-201ENSMUST00000186221 318 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm20058-201ENSMUST00000186939 284 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm28572-201ENSMUST00000187444 318 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm29597-201ENSMUST00000188035 308 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm37658-201ENSMUST00000192672 315 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm45288-201ENSMUST00000210236 151 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm17990-201ENSMUST00000211728 553 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Nkx2-1P50220 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm25793-201ENSMUST00000083287 107 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.42□□□□□ -2.02
Nkx2-1P50220 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nkx2-1P50220 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx2-1P50220 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx2-1P50220 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx2-1P50220 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Nkx2-1P50220 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Nkx2-1P50220 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms