Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm22154-201ENSMUST00000083844 131 ntBASIC3.38□□□□□ -1.87
Ercc3P49135 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ercc3P49135 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.38□□□□□ -1.87
Ercc3P49135 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Ercc3P49135 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm27796-201ENSMUST00000183863 261 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm29553-201ENSMUST00000189692 279 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Mir691-201ENSMUST00000199719 78 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.37□□□□□ -1.87
Ercc3P49135 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.37□□□□□ -1.87
Ercc3P49135 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.37□□□□□ -1.87
Ercc3P49135 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm24043-201ENSMUST00000083108 116 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm23727-201ENSMUST00000083352 164 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Gm23247-201ENSMUST00000083373 107 ntBASIC3.37□□□□□ -1.87
Ercc3P49135 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ercc3P49135 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Ercc3P49135 Gm16171-201ENSMUST00000118004 324 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm12793-201ENSMUST00000119268 292 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm25280-201ENSMUST00000157269 101 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm24908-201ENSMUST00000157294 127 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm24958-201ENSMUST00000158009 97 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.36□□□□□ -1.87
Ercc3P49135 Gm8338-201ENSMUST00000163928 363 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm21737-201ENSMUST00000178112 664 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm21815-201ENSMUST00000178213 664 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm20874-201ENSMUST00000178356 663 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm20901-201ENSMUST00000180177 664 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Ercc3P49135 Gm28647-201ENSMUST00000188416 197 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm21647-201ENSMUST00000189755 664 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ercc3P49135 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm45402-201ENSMUST00000211796 223 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ercc3P49135 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Ercc3P49135 Gm25698-201ENSMUST00000082897 107 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Gm3867-201ENSMUST00000086108 279 ntBASIC3.36□□□□□ -1.87
Ercc3P49135 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Ercc3P49135 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ercc3P49135 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ercc3P49135 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Gm11556-201ENSMUST00000120751 288 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Snord93-201ENSMUST00000175580 71 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.35□□□□□ -1.87
Ercc3P49135 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Gm44336-201ENSMUST00000203696 468 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.35□□□□□ -1.87
Ercc3P49135 Gm24037-201ENSMUST00000082871 180 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Gm26327-201ENSMUST00000093724 111 ntBASIC3.35□□□□□ -1.87
Ercc3P49135 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ercc3P49135 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ercc3P49135 Mir743b-201ENSMUST00000104751 77 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm13355-201ENSMUST00000117996 317 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm15896-201ENSMUST00000118045 440 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm14897-201ENSMUST00000118213 207 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm11363-201ENSMUST00000121672 548 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm26277-201ENSMUST00000157097 152 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm24997-201ENSMUST00000157910 105 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm23411-201ENSMUST00000157988 62 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm24724-201ENSMUST00000158230 107 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm23016-201ENSMUST00000158431 62 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm22136-201ENSMUST00000158751 268 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ercc3P49135 Gm25476-201ENSMUST00000175125 185 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Gm28506-201ENSMUST00000189937 150 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.34□□□□□ -1.87
Ercc3P49135 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.34□□□□□ -1.87
Ercc3P49135 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.34□□□□□ -1.87
Ercc3P49135 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ercc3P49135 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ercc3P49135 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.34□□□□□ -1.88
Ercc3P49135 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ercc3P49135 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ercc3P49135 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.33□□□□□ -1.88
Ercc3P49135 Gm11471-201ENSMUST00000121824 198 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Gm12872-201ENSMUST00000121835 320 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Gm25970-201ENSMUST00000157165 86 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Gm24885-201ENSMUST00000158783 270 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.33□□□□□ -1.88
Ercc3P49135 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.33□□□□□ -1.88
Ercc3P49135 Gm38041-201ENSMUST00000194445 661 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.33□□□□□ -1.88
Ercc3P49135 Gm32222-201ENSMUST00000203296 298 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms