Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm10088-201ENSMUST00000074116 423 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm24268-201ENSMUST00000082990 110 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm24044-201ENSMUST00000083107 156 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col2a1P28481 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col2a1P28481 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col2a1P28481 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col2a1P28481 Gm22673-201ENSMUST00000104415 131 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm13804-201ENSMUST00000119552 172 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm15106-201ENSMUST00000119691 821 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm13273-201ENSMUST00000119737 159 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm14530-201ENSMUST00000122391 333 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col2a1P28481 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col2a1P28481 Cfap61-214ENSMUST00000167179 183 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm23967-201ENSMUST00000175062 78 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Mir3066-201ENSMUST00000175296 83 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm28283-201ENSMUST00000185509 178 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.12□□□□□ -2.07
Col2a1P28481 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.12□□□□□ -2.07
Col2a1P28481 Npn2-202ENSMUST00000189275 235 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm28151-201ENSMUST00000189404 951 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm5034-201ENSMUST00000199115 634 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Gm44142-201ENSMUST00000203358 311 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col2a1P28481 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col2a1P28481 Rny3-201ENSMUST00000083011 102 ntBASIC2.12□□□□□ -2.07
Col2a1P28481 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col2a1P28481 Mir669l-201ENSMUST00000103771 98 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm15714-201ENSMUST00000117168 250 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm14602-201ENSMUST00000118625 340 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm14588-201ENSMUST00000119895 172 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm12926-201ENSMUST00000121158 409 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.11□□□□□ -2.07
Col2a1P28481 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.11□□□□□ -2.07
Col2a1P28481 Mir5101-201ENSMUST00000175181 83 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.11□□□□□ -2.07
Col2a1P28481 Gm25194-201ENSMUST00000177987 79 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm23267-201ENSMUST00000178490 132 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Col2a1P28481 Gm23144-201ENSMUST00000180226 107 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm27313-201ENSMUST00000183500 142 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm28650-201ENSMUST00000188413 411 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col2a1P28481 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm23645-201ENSMUST00000083228 108 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Gm23097-201ENSMUST00000083448 105 ntBASIC2.11□□□□□ -2.07
Col2a1P28481 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col2a1P28481 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Col2a1P28481 Mir301b-201ENSMUST00000102333 97 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm11430-201ENSMUST00000121317 217 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm14362-201ENSMUST00000121679 273 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm22026-201ENSMUST00000122735 281 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.1□□□□□ -2.07
Col2a1P28481 Gm15254-201ENSMUST00000149567 273 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm8121-201ENSMUST00000153583 499 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col2a1P28481 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm22290-201ENSMUST00000177655 107 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm22583-201ENSMUST00000178031 107 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.1□□□□□ -2.07
Col2a1P28481 Gm17946-201ENSMUST00000186856 538 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm19649-201ENSMUST00000201126 822 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gm5670-201ENSMUST00000093546 372 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col2a1P28481 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Col2a1P28481 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.1□□□□□ -2.07
Col2a1P28481 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm23744-201ENSMUST00000104231 149 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm25274-201ENSMUST00000104296 135 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm23987-201ENSMUST00000117039 129 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm13210-201ENSMUST00000121483 273 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm15065-201ENSMUST00000121699 273 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm23206-201ENSMUST00000122720 184 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm21726-201ENSMUST00000179654 392 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm22631-201ENSMUST00000179656 94 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm37431-201ENSMUST00000195102 111 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col2a1P28481 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.09□□□□□ -2.07
Col2a1P28481 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col2a1P28481 Gm44938-201ENSMUST00000208614 427 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.09□□□□□ -2.07
Col2a1P28481 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms