Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25748-201ENSMUST00000175487 70 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sdc1P18828 Gm28399-201ENSMUST00000186221 318 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm28572-201ENSMUST00000187444 318 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm28745-201ENSMUST00000190069 305 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm44135-201ENSMUST00000205221 368 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm45730-201ENSMUST00000212560 395 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm18774-201ENSMUST00000218269 601 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc1P18828 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc1P18828 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc1P18828 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Sdc1P18828 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.74□□□□□ -2.13
Sdc1P18828 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm14973-201ENSMUST00000117248 255 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm14551-201ENSMUST00000120802 256 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm12639-201ENSMUST00000121400 493 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm14530-201ENSMUST00000122391 333 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm25490-201ENSMUST00000158734 130 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc1P18828 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm18417-201ENSMUST00000176564 648 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm25020-201ENSMUST00000178071 107 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm24019-201ENSMUST00000178620 107 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm26243-201ENSMUST00000179260 107 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm21638-201ENSMUST00000179473 836 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm27760-201ENSMUST00000185048 114 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc1P18828 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Sdc1P18828 Gm37709-201ENSMUST00000195074 600 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm42509-201ENSMUST00000197390 781 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm43529-201ENSMUST00000199178 412 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm44083-201ENSMUST00000203114 337 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm44938-201ENSMUST00000208614 427 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm2628-201ENSMUST00000218019 426 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm23296-201ENSMUST00000082555 107 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm22620-201ENSMUST00000082700 133 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Gm24859-201ENSMUST00000082729 107 ntBASIC1.74□□□□□ -2.13
Sdc1P18828 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Sdc1P18828 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sdc1P18828 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc1P18828 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Mir682-201ENSMUST00000102281 96 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm11935-201ENSMUST00000118608 399 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm15077-201ENSMUST00000122344 362 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm23981-201ENSMUST00000157136 106 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm25454-201ENSMUST00000157947 315 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm22733-201ENSMUST00000158094 91 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm25658-201ENSMUST00000158472 128 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm25413-201ENSMUST00000158544 312 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm22668-201ENSMUST00000158716 260 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm23025-201ENSMUST00000158769 111 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Sdc1P18828 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm23862-201ENSMUST00000180342 94 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm28113-201ENSMUST00000188280 229 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc1P18828 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
Sdc1P18828 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm43510-201ENSMUST00000197922 353 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.73□□□□□ -2.13
Sdc1P18828 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.73□□□□□ -2.13
Sdc1P18828 AC144783.2-201ENSMUST00000219089 195 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.73□□□□□ -2.13
Sdc1P18828 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Sdc1P18828 Gm26328-201ENSMUST00000082821 107 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm25794-201ENSMUST00000083286 107 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Mir301-201ENSMUST00000083655 86 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
Sdc1P18828 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc1P18828 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.73□□□□□ -2.13
Sdc1P18828 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sdc1P18828 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Sdc1P18828 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Sdc1P18828 Mir582-201ENSMUST00000103758 81 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm24984-201ENSMUST00000104454 133 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm14793-201ENSMUST00000118739 311 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm14215-201ENSMUST00000120578 221 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm15281-201ENSMUST00000125181 351 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.72□□□□□ -2.13
Sdc1P18828 Gm24783-201ENSMUST00000157639 100 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm17187-201ENSMUST00000164622 410 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Gm29231-201ENSMUST00000179850 319 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.72□□□□□ -2.13
Sdc1P18828 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Sdc1P18828 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms