Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm12897-201ENSMUST00000120341 250 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Gm23121-201ENSMUST00000157653 173 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Gm24402-201ENSMUST00000157873 91 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Gm2522-201ENSMUST00000204280 322 ntBASIC4.35□□□□□ -1.71
Msx1P13297 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.35□□□□□ -1.71
Msx1P13297 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.35□□□□□ -1.71
Msx1P13297 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC4.35□□□□□ -1.71
Msx1P13297 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msx1P13297 Mir99a-201ENSMUST00000083596 65 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Msx1P13297 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msx1P13297 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msx1P13297 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Msx1P13297 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.35□□□□□ -1.71
Msx1P13297 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Msx1P13297 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msx1P13297 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Msx1P13297 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msx1P13297 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msx1P13297 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msx1P13297 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Msx1P13297 Gm24283-201ENSMUST00000104233 107 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Snord89-201ENSMUST00000104516 110 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm23789-201ENSMUST00000122536 301 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm22107-201ENSMUST00000122548 100 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm22553-201ENSMUST00000157797 295 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm26373-201ENSMUST00000157833 103 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm20428-201ENSMUST00000174365 283 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm28825-201ENSMUST00000186233 238 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm29553-201ENSMUST00000189692 279 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm34139-201ENSMUST00000196166 294 ntBASIC4.34□□□□□ -1.71
Msx1P13297 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.34□□□□□ -1.71
Msx1P13297 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.34□□□□□ -1.71
Msx1P13297 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm22248-201ENSMUST00000082482 150 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Gm23099-201ENSMUST00000083454 139 ntBASIC4.34□□□□□ -1.71
Msx1P13297 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msx1P13297 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Msx1P13297 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
Msx1P13297 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Msx1P13297 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Msx1P13297 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Msx1P13297 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Msx1P13297 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx1P13297 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Gm25022-201ENSMUST00000102205 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Msx1P13297 Gm15067-201ENSMUST00000119534 156 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Gm22958-201ENSMUST00000122512 184 ntBASIC4.33□□□□□ -1.72
Msx1P13297 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Gm22601-201ENSMUST00000157595 250 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-6-201ENSMUST00000177790 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-3-201ENSMUST00000178082 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-7-201ENSMUST00000178635 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-10-201ENSMUST00000179320 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-5-201ENSMUST00000179352 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-2-201ENSMUST00000179447 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-9-201ENSMUST00000179752 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-4-201ENSMUST00000179923 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir467a-8-201ENSMUST00000180070 83 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Mir6418-201ENSMUST00000185075 115 ntBASIC4.33□□□□□ -1.72
Msx1P13297 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC4.33□□□□□ -1.72
Msx1P13297 Gm25789-201ENSMUST00000083294 76 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
Msx1P13297 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx1P13297 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx1P13297 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.33□□□□□ -1.72
Msx1P13297 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx1P13297 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Msx1P13297 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.32□□□□□ -1.72
Msx1P13297 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Gm24774-201ENSMUST00000157384 134 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Mir7047-201ENSMUST00000184595 64 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm29613-201ENSMUST00000185846 313 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm29544-201ENSMUST00000188860 313 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm28808-201ENSMUST00000190978 313 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Mir7657-201ENSMUST00000196051 57 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm43304-201ENSMUST00000196803 326 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.32□□□□□ -1.72
Msx1P13297 AC134601.1-201ENSMUST00000221058 109 ntBASIC4.32□□□□□ -1.72
Msx1P13297 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.32□□□□□ -1.72
Msx1P13297 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.32□□□□□ -1.72
Msx1P13297 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.32□□□□□ -1.72
Msx1P13297 AC124104.1-201ENSMUST00000226279 417 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Gm23302-201ENSMUST00000082710 100 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms