Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11854-201ENSMUST00000117839 446 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.11□□□□□ -2.23
Col1a1P11087 Gm15508-201ENSMUST00000160330 325 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Col1a1P11087 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.11□□□□□ -2.23
Col1a1P11087 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.11□□□□□ -2.23
Col1a1P11087 Gm44857-201ENSMUST00000208331 196 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Col1a1P11087 Gm23932-201ENSMUST00000082914 107 ntBASIC1.11□□□□□ -2.23
Col1a1P11087 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm22270-201ENSMUST00000104034 132 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm24555-201ENSMUST00000104548 124 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm14428-201ENSMUST00000120408 822 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm14129-201ENSMUST00000122436 291 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm26414-201ENSMUST00000157674 269 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm25335-201ENSMUST00000158043 103 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm37576-201ENSMUST00000194228 372 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm33866-201ENSMUST00000196911 289 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm42672-201ENSMUST00000197821 352 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm43708-201ENSMUST00000198857 961 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.1□□□□□ -2.23
Col1a1P11087 Gm44794-201ENSMUST00000206550 411 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm29920-201ENSMUST00000206876 754 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Gm9318-201ENSMUST00000222444 438 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.1□□□□□ -2.23
Col1a1P11087 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
Col1a1P11087 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
Col1a1P11087 Gm23321-201ENSMUST00000104465 126 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm7350-201ENSMUST00000120964 636 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm26348-201ENSMUST00000157528 240 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm26358-201ENSMUST00000158215 97 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.09□□□□□ -2.24
Col1a1P11087 Gm24086-201ENSMUST00000175171 98 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm27722-201ENSMUST00000183908 76 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Mir7215-201ENSMUST00000200383 51 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 Gm45386-201ENSMUST00000210194 218 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.09□□□□□ -2.24
Col1a1P11087 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.09□□□□□ -2.24
Col1a1P11087 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Col1a1P11087 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Col1a1P11087 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm14868-201ENSMUST00000117840 216 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.08□□□□□ -2.24
Col1a1P11087 Gm9071-201ENSMUST00000165915 474 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col1a1P11087 Mir3112-201ENSMUST00000175431 82 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm23933-201ENSMUST00000178405 79 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm22252-201ENSMUST00000179316 79 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col1a1P11087 Gm7329-201ENSMUST00000185915 210 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm42533-201ENSMUST00000196247 157 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm42774-201ENSMUST00000198854 283 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Gm45116-201ENSMUST00000207392 275 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.08□□□□□ -2.24
Col1a1P11087 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Col1a1P11087 Gm25810-201ENSMUST00000082752 108 ntBASIC1.08□□□□□ -2.24
Col1a1P11087 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Col1a1P11087 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Gm14899-201ENSMUST00000118673 548 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.07□□□□□ -2.24
Col1a1P11087 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Col1a1P11087 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Col1a1P11087 Gm37000-201ENSMUST00000193058 428 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Gm19147-201ENSMUST00000199622 652 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
Col1a1P11087 Gm44720-201ENSMUST00000206076 260 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Gm44585-201ENSMUST00000207150 607 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Gm24920-201ENSMUST00000083018 85 ntBASIC1.07□□□□□ -2.24
Col1a1P11087 Gm23431-201ENSMUST00000104006 107 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm14918-201ENSMUST00000118153 268 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm15497-201ENSMUST00000119137 551 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm11862-201ENSMUST00000119678 659 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm11785-201ENSMUST00000120165 601 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm25220-201ENSMUST00000157546 95 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm24467-201ENSMUST00000157887 126 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm22315-201ENSMUST00000158010 143 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm25633-201ENSMUST00000178565 107 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Mir6338-201ENSMUST00000183389 109 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Mir6372-201ENSMUST00000185114 109 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Gm29641-201ENSMUST00000188955 259 ntBASIC1.06□□□□□ -2.24
Col1a1P11087 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms