Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22033-201ENSMUST00000116947 90 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22107-201ENSMUST00000122548 100 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22553-201ENSMUST00000157797 295 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22069-201ENSMUST00000179911 107 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm28825-201ENSMUST00000186233 238 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm43604-201ENSMUST00000199799 705 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.6□□□□□ -1.83
Hoxd3P09027 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22248-201ENSMUST00000082482 150 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm22978-201ENSMUST00000082607 160 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm43654-201ENSMUST00000200664 3417 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hoxd3P09027 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxd3P09027 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxd3P09027 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxd3P09027 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxd3P09027 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm22473-201ENSMUST00000104114 132 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm26249-201ENSMUST00000116708 118 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm15012-201ENSMUST00000119176 106 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm13232-201ENSMUST00000121816 632 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm25060-201ENSMUST00000157374 130 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Mir6399-201ENSMUST00000184050 84 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm27568-201ENSMUST00000184220 99 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm27564-201ENSMUST00000185196 96 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm43304-201ENSMUST00000196803 326 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Gm42666-201ENSMUST00000201954 152 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Mir27a-201ENSMUST00000083510 87 ntBASIC3.59□□□□□ -1.83
Hoxd3P09027 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxd3P09027 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hoxd3P09027 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Hoxd3P09027 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Hoxd3P09027 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm42559-201ENSMUST00000201811 3532 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm23709-201ENSMUST00000104364 130 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm22498-201ENSMUST00000104497 86 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm15861-201ENSMUST00000120979 339 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm22986-201ENSMUST00000122753 130 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm24402-201ENSMUST00000157873 91 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm24961-201ENSMUST00000157918 184 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm29604-201ENSMUST00000187176 163 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm28830-201ENSMUST00000188192 213 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm29553-201ENSMUST00000189692 279 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm43676-201ENSMUST00000197532 540 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.58□□□□□ -1.84
Hoxd3P09027 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hoxd3P09027 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxd3P09027 Gm45211-201ENSMUST00000206208 2650 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25022-201ENSMUST00000102205 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm12760-201ENSMUST00000117861 482 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms