Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col5a1O88207 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col5a1O88207 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col5a1O88207 Gm12550-201ENSMUST00000118478 329 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm24901-201ENSMUST00000158125 110 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Col5a1O88207 Mir7059-201ENSMUST00000184825 59 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.65□□□□□ -2.15
Col5a1O88207 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Col5a1O88207 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm15235-201ENSMUST00000200572 194 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm45590-201ENSMUST00000209715 262 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.65□□□□□ -2.15
Col5a1O88207 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm18113-201ENSMUST00000220630 303 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm24622-201ENSMUST00000082619 162 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Gm24268-201ENSMUST00000082990 110 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.65□□□□□ -2.15
Col5a1O88207 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Col5a1O88207 Gm24951-201ENSMUST00000102182 109 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm24280-201ENSMUST00000104237 134 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm15526-201ENSMUST00000112504 204 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm11490-201ENSMUST00000118128 272 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm11356-201ENSMUST00000118974 192 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm14835-201ENSMUST00000119039 315 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm14736-201ENSMUST00000121470 336 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm13356-201ENSMUST00000121678 335 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm23206-201ENSMUST00000122720 184 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col5a1O88207 Gm25559-201ENSMUST00000157182 74 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm25194-201ENSMUST00000177987 79 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm28552-201ENSMUST00000190725 388 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm18341-201ENSMUST00000197538 622 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm45173-201ENSMUST00000206819 305 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.64□□□□□ -2.15
Col5a1O88207 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm9068-201ENSMUST00000217393 455 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm46194-201ENSMUST00000218136 320 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm30155-201ENSMUST00000223458 339 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Col5a1O88207 Gm25796-201ENSMUST00000082645 163 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm25135-201ENSMUST00000082648 143 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm25792-201ENSMUST00000083289 100 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Rny1-201ENSMUST00000083767 112 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Col5a1O88207 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col5a1O88207 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Col5a1O88207 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col5a1O88207 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.64□□□□□ -2.15
Col5a1O88207 Gm14588-201ENSMUST00000119895 172 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm13239-201ENSMUST00000119920 637 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm14903-201ENSMUST00000122435 537 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm23473-201ENSMUST00000158883 116 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.63□□□□□ -2.15
Col5a1O88207 Mir7052-201ENSMUST00000184821 65 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm3010-201ENSMUST00000198805 448 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm45232-201ENSMUST00000207811 162 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm7495-201ENSMUST00000215099 426 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm23455-201ENSMUST00000083331 100 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22003-201ENSMUST00000101885 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm24438-201ENSMUST00000157893 115 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22665-201ENSMUST00000158720 275 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm6788-201ENSMUST00000166459 270 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm24540-201ENSMUST00000177627 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Col5a1O88207 Gm25256-201ENSMUST00000177746 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22584-201ENSMUST00000177935 92 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22822-201ENSMUST00000177941 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Rnu6-201ENSMUST00000178023 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm24753-201ENSMUST00000178183 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm25829-201ENSMUST00000178275 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22092-201ENSMUST00000178290 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm24486-201ENSMUST00000178420 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm23217-201ENSMUST00000178482 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm23092-201ENSMUST00000178688 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm25709-201ENSMUST00000178844 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm25547-201ENSMUST00000178877 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm24722-201ENSMUST00000179017 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22969-201ENSMUST00000179018 107 ntBASIC1.63□□□□□ -2.15
Col5a1O88207 Gm22129-201ENSMUST00000179034 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms