Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.26□□□□□ -2.21
Sdc4O35988 Gm22559-201ENSMUST00000157329 134 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm24716-201ENSMUST00000157524 104 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Snord13-201ENSMUST00000157627 104 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm24551-201ENSMUST00000158645 92 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm23636-201ENSMUST00000175070 95 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm24264-201ENSMUST00000179835 94 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm29550-201ENSMUST00000185543 285 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.26□□□□□ -2.21
Sdc4O35988 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.26□□□□□ -2.21
Sdc4O35988 Gm19457-201ENSMUST00000200995 448 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm44459-201ENSMUST00000203926 160 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm44088-201ENSMUST00000204595 237 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm45116-201ENSMUST00000207392 275 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Sdc4O35988 Gm25411-201ENSMUST00000083760 151 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.26□□□□□ -2.21
Sdc4O35988 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm11359-201ENSMUST00000120039 567 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm14915-201ENSMUST00000120747 204 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.25□□□□□ -2.21
Sdc4O35988 Gm23172-201ENSMUST00000157160 124 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm22382-201ENSMUST00000158185 130 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.25□□□□□ -2.21
Sdc4O35988 Gm25994-201ENSMUST00000175392 101 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.25□□□□□ -2.21
Sdc4O35988 Mir7059-201ENSMUST00000184825 59 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Sdc4O35988 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm43510-201ENSMUST00000197922 353 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm23650-201ENSMUST00000083355 70 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Gm25409-201ENSMUST00000083764 131 ntBASIC1.25□□□□□ -2.21
Sdc4O35988 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Sdc4O35988 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc4O35988 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc4O35988 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm24865-201ENSMUST00000103246 96 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm15714-201ENSMUST00000117168 250 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm14358-201ENSMUST00000118458 403 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm9703-201ENSMUST00000119573 343 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm14600-201ENSMUST00000121032 630 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm25621-201ENSMUST00000157223 114 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc4O35988 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Sdc4O35988 Gm19891-201ENSMUST00000189771 303 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm29011-201ENSMUST00000191059 712 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm33354-201ENSMUST00000195448 906 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.24□□□□□ -2.21
Sdc4O35988 Snord43-201ENSMUST00000199549 108 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm35558-202ENSMUST00000221819 499 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Gm5670-201ENSMUST00000093546 372 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.24□□□□□ -2.21
Sdc4O35988 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.23□□□□□ -2.21
Sdc4O35988 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Sdc4O35988 Gm12646-201ENSMUST00000119144 238 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm14770-201ENSMUST00000122197 312 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm22082-201ENSMUST00000157587 161 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm22098-201ENSMUST00000157930 85 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm8207-201ENSMUST00000171204 502 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.23□□□□□ -2.21
Sdc4O35988 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.23□□□□□ -2.21
Sdc4O35988 Gm44308-201ENSMUST00000197080 99 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.23□□□□□ -2.21
Sdc4O35988 Gm43406-201ENSMUST00000200356 334 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm19140-201ENSMUST00000209790 421 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm45456-201ENSMUST00000210841 243 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Gm7984-201ENSMUST00000060640 538 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Sdc4O35988 Gm24805-201ENSMUST00000082931 104 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Mir151-201ENSMUST00000083678 68 ntBASIC1.23□□□□□ -2.21
Sdc4O35988 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Sdc4O35988 Gm14932-201ENSMUST00000117112 453 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm14835-201ENSMUST00000119039 315 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.22□□□□□ -2.21
Sdc4O35988 Gm26348-201ENSMUST00000157528 240 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms