Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm25606-201ENSMUST00000158363 95 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm29641-201ENSMUST00000188955 259 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm42438-201ENSMUST00000197832 974 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm19147-201ENSMUST00000199622 652 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Col6a5A6H584 Gm25199-201ENSMUST00000083095 104 ntBASIC0.48□□□□□ -2.33
Col6a5A6H584 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm14073-201ENSMUST00000117344 381 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm13378-201ENSMUST00000117483 336 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm22013-201ENSMUST00000158788 103 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm23190-201ENSMUST00000180307 64 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm29492-201ENSMUST00000187124 457 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm44137-201ENSMUST00000203670 367 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 AC154271.1-201ENSMUST00000224780 383 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm25138-201ENSMUST00000083248 136 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm29550-201ENSMUST00000185543 285 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm37431-201ENSMUST00000195102 111 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm43115-201ENSMUST00000196244 160 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm44301-201ENSMUST00000200362 143 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm18645-202ENSMUST00000212222 760 ntBASIC0.47□□□□□ -2.33
Col6a5A6H584 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC0.47□□□□□ -2.33
Col6a5A6H584 Gm20534-201ENSMUST00000172957 172 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm22995-201ENSMUST00000179670 107 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm18956-201ENSMUST00000192857 480 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm18338-201ENSMUST00000222381 560 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm23629-201ENSMUST00000082465 107 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm24535-201ENSMUST00000083140 107 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm23520-201ENSMUST00000093736 107 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm11898-201ENSMUST00000117161 385 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm16186-201ENSMUST00000120132 216 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm22839-201ENSMUST00000158436 304 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm33354-201ENSMUST00000195448 906 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm9373-201ENSMUST00000208724 599 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC0.46□□□□□ -2.34
Col6a5A6H584 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.46□□□□□ -2.34
Col6a5A6H584 Gm25318-201ENSMUST00000122554 314 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC0.45□□□□□ -2.34
Col6a5A6H584 Snord8-201ENSMUST00000175303 110 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm22633-201ENSMUST00000179834 107 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm28453-203ENSMUST00000187041 189 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm22759-201ENSMUST00000102276 96 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Mir669o-201ENSMUST00000103898 96 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC0.45□□□□□ -2.34
Col6a5A6H584 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm45878-201ENSMUST00000211839 241 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Gm25802-201ENSMUST00000082639 77 ntBASIC0.45□□□□□ -2.34
Col6a5A6H584 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Col6a5A6H584 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm15382-201ENSMUST00000118011 537 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm15213-201ENSMUST00000122098 216 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm22768-201ENSMUST00000158366 153 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.44□□□□□ -2.34
Col6a5A6H584 Mir7218-201ENSMUST00000200050 59 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 AA413626-201ENSMUST00000121125 494 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm15692-201ENSMUST00000152173 352 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm24725-201ENSMUST00000158229 125 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm42475-201ENSMUST00000201212 295 ntBASIC0.44□□□□□ -2.34
Col6a5A6H584 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col6a5A6H584 Gm14731-201ENSMUST00000119216 376 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Gm24400-201ENSMUST00000157865 107 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Gm20630-201ENSMUST00000177387 551 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Olfr197-201ENSMUST00000080031 926 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Col6a5A6H584 Gm16265-201ENSMUST00000134558 108 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Scarna8-201ENSMUST00000158333 131 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Gm2930-201ENSMUST00000170403 474 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Col6a5A6H584 Gm44794-201ENSMUST00000206550 411 ntBASIC0.43□□□□□ -2.34
Col6a5A6H584 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.43□□□□□ -2.34
Col6a5A6H584 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm24464-201ENSMUST00000179697 107 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm26701-201ENSMUST00000181571 234 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm27402-201ENSMUST00000183890 120 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm27935-201ENSMUST00000183894 79 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Gm6607-201ENSMUST00000215035 328 ntBASIC0.42□□□□□ -2.34
Col6a5A6H584 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Col6a5A6H584 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 170.5 ms