Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm16100-201ENSMUST00000120489 231 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm24942-201ENSMUST00000158328 114 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm17204-201ENSMUST00000167936 478 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm25707-201ENSMUST00000175120 96 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm28794-201ENSMUST00000185276 136 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm29460-201ENSMUST00000188607 714 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm43250-201ENSMUST00000196536 273 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm42509-201ENSMUST00000197390 781 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 AC158392.1-201ENSMUST00000223720 1069 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm23932-201ENSMUST00000082914 107 ntBASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.36□□□□□ -2.35
Trav4-3A0A0B4J1K1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm23766-201ENSMUST00000103894 80 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm15530-201ENSMUST00000122206 555 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm25423-201ENSMUST00000157609 107 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm22768-201ENSMUST00000158366 153 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm22164-201ENSMUST00000158413 106 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm21171-201ENSMUST00000180048 673 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm9402-201ENSMUST00000196849 388 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Gm44024-201ENSMUST00000203008 476 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 CT030238.4-201ENSMUST00000228579 801 ntBASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Trav4-3A0A0B4J1K1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm12640-201ENSMUST00000120097 310 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm6587-201ENSMUST00000120219 613 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11606-201ENSMUST00000120706 617 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm15214-201ENSMUST00000122155 470 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22233-201ENSMUST00000157464 114 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25868-201ENSMUST00000158253 114 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm20477-201ENSMUST00000174028 280 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22716-201ENSMUST00000177596 107 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mir7225-201ENSMUST00000184178 54 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mir6372-201ENSMUST00000185114 109 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm42834-201ENSMUST00000196845 256 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm44254-201ENSMUST00000204184 322 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm45701-201ENSMUST00000212049 235 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm45730-201ENSMUST00000212560 395 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC125523.1-201ENSMUST00000228018 934 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22997-201ENSMUST00000082845 107 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.34□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mdga2-203ENSMUST00000113942 423 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11572-201ENSMUST00000119164 120 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm13588-201ENSMUST00000120026 135 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm11389-201ENSMUST00000121407 430 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm42570-201ENSMUST00000195937 292 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm44465-201ENSMUST00000199536 114 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm44408-201ENSMUST00000200205 66 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25792-201ENSMUST00000083289 100 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Snora34-201ENSMUST00000083402 138 ntBASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm15211-201ENSMUST00000118932 528 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm26238-201ENSMUST00000175538 117 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm29011-201ENSMUST00000191059 712 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm37081-201ENSMUST00000192034 196 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm25820-202ENSMUST00000197479 128 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Mir6962-201ENSMUST00000199512 63 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm31532-201ENSMUST00000203555 767 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm10092-201ENSMUST00000077110 180 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm23246-201ENSMUST00000083371 67 ntBASIC0.32□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm12550-201ENSMUST00000118478 329 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm22482-201ENSMUST00000122563 359 ntBASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav4-3A0A0B4J1K1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms