Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm22598-201ENSMUST00000157600 127 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm24601-201ENSMUST00000157970 143 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm24084-201ENSMUST00000175173 137 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm5829-201ENSMUST00000191383 351 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm17966-201ENSMUST00000193453 594 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm43035-201ENSMUST00000197626 517 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm43155-201ENSMUST00000202661 494 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm7065-201ENSMUST00000222150 474 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Mir496a-201ENSMUST00000093627 79 ntBASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trav13d-1A0A075B606 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm22658-201ENSMUST00000104196 155 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm13439-201ENSMUST00000117541 409 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm15466-201ENSMUST00000122299 333 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm24908-201ENSMUST00000157294 127 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm22380-201ENSMUST00000157479 95 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm22890-201ENSMUST00000158642 144 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm29490-201ENSMUST00000190923 342 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm45080-201ENSMUST00000206648 283 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 CT010506.3-201ENSMUST00000223699 410 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.6□□□□□ -1.99
Trav13d-1A0A075B606 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm24987-201ENSMUST00000104453 134 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm24635-201ENSMUST00000122712 128 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm23602-201ENSMUST00000157258 132 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm23331-201ENSMUST00000157423 108 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm22527-201ENSMUST00000158816 106 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm17100-201ENSMUST00000168963 272 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm44419-201ENSMUST00000203338 229 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm40810-201ENSMUST00000219149 253 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm4945-201ENSMUST00000075152 453 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Gm25651-201ENSMUST00000083782 119 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Snord15a-201ENSMUST00000083888 148 ntBASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav13d-1A0A075B606 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trav13d-1A0A075B606 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Trav13d-1A0A075B606 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.59□□□□□ -2
Trav13d-1A0A075B606 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm23142-201ENSMUST00000101848 105 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm26240-201ENSMUST00000101893 105 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm24582-201ENSMUST00000103967 103 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm11460-201ENSMUST00000118200 361 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm12235-201ENSMUST00000118596 170 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm12876-201ENSMUST00000120975 408 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm12155-201ENSMUST00000121267 160 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm12785-201ENSMUST00000122052 172 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm23667-201ENSMUST00000157466 120 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm23755-201ENSMUST00000157578 343 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm23123-201ENSMUST00000157648 144 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm27592-201ENSMUST00000157729 126 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm24846-201ENSMUST00000158033 108 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Mir1934-201ENSMUST00000158127 83 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm24727-201ENSMUST00000158231 144 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm24930-201ENSMUST00000158315 83 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm22853-201ENSMUST00000174974 131 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm22174-201ENSMUST00000175050 125 ntBASIC2.58□□□□□ -2
Trav13d-1A0A075B606 Gm22692-201ENSMUST00000175055 125 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms