Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Mir676-201ENSMUST00000102443 89 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm14878-201ENSMUST00000118167 293 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm14688-201ENSMUST00000119169 303 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm23101-201ENSMUST00000157550 137 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm37030-201ENSMUST00000194254 295 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Mir3969-201ENSMUST00000197106 92 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm13761-201ENSMUST00000117238 807 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm16005-201ENSMUST00000120515 269 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm23655-201ENSMUST00000122627 105 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm26020-201ENSMUST00000122729 183 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm16250-201ENSMUST00000148974 256 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm22516-201ENSMUST00000158266 124 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm24388-201ENSMUST00000177872 107 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm37918-201ENSMUST00000192071 120 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Mir20a-201ENSMUST00000083508 107 ntBASIC4.34□□□□□ -1.71
Nubp1Q9R060 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nubp1Q9R060 Gm45393-201ENSMUST00000211634 2631 ntBASIC4.34□□□□□ -1.72
Nubp1Q9R060 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.34□□□□□ -1.72
Nubp1Q9R060 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Nubp1Q9R060 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Nubp1Q9R060 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nubp1Q9R060 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Snord90-201ENSMUST00000104568 111 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm24846-201ENSMUST00000158033 108 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm22527-201ENSMUST00000158816 106 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm23476-201ENSMUST00000158881 274 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm37659-201ENSMUST00000194574 111 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm8719-201ENSMUST00000203602 534 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.33□□□□□ -1.72
Nubp1Q9R060 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nubp1Q9R060 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm25595-201ENSMUST00000102273 97 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm22758-201ENSMUST00000102275 96 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm12423-201ENSMUST00000118334 135 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm11786-201ENSMUST00000120799 155 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm14649-201ENSMUST00000121814 324 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm24010-201ENSMUST00000157731 282 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm3145-201ENSMUST00000188584 220 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 mt-Tt-201ENSMUST00000082422 67 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm22507-201ENSMUST00000082773 160 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Gm24031-201ENSMUST00000083930 131 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Synpr-207ENSMUST00000223583 3362 ntBASIC4.32□□□□□ -1.72
Nubp1Q9R060 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nubp1Q9R060 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms