Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm24348-201ENSMUST00000158710 130 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm27342-201ENSMUST00000183530 109 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm44825-201ENSMUST00000207557 150 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm44598-201ENSMUST00000207566 150 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm25403-201ENSMUST00000082971 143 ntBASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trem3Q9JKE1 Gm22779-201ENSMUST00000104085 107 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm13439-201ENSMUST00000117541 409 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm23381-201ENSMUST00000157676 94 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm24551-201ENSMUST00000158645 92 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm27878-201ENSMUST00000184000 106 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28838-201ENSMUST00000186338 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm29635-201ENSMUST00000187221 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm29026-201ENSMUST00000187787 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28797-201ENSMUST00000188543 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28855-201ENSMUST00000188680 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28705-201ENSMUST00000189548 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28939-201ENSMUST00000190351 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm28223-201ENSMUST00000190469 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm29092-201ENSMUST00000190768 315 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm29754-201ENSMUST00000206269 358 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Gm23246-201ENSMUST00000083371 67 ntBASIC1.17□□□□□ -2.22
Trem3Q9JKE1 Snord13-201ENSMUST00000157627 104 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm6395-201ENSMUST00000167639 691 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Snord87-201ENSMUST00000175437 87 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm27959-201ENSMUST00000185172 111 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm29657-201ENSMUST00000189807 342 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm45439-201ENSMUST00000211723 359 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm46312-201ENSMUST00000220961 420 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Gm22974-201ENSMUST00000083301 103 ntBASIC1.16□□□□□ -2.22
Trem3Q9JKE1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Trem3Q9JKE1 Mir758-201ENSMUST00000103260 81 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm26143-201ENSMUST00000104480 108 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm15211-201ENSMUST00000118932 528 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm14835-201ENSMUST00000119039 315 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm12825-201ENSMUST00000120249 563 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm13903-201ENSMUST00000120945 193 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Mir3092-201ENSMUST00000174954 96 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm24333-201ENSMUST00000175101 84 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm29550-201ENSMUST00000185543 285 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm28466-201ENSMUST00000190678 659 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.15□□□□□ -2.23
Trem3Q9JKE1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm18252-203ENSMUST00000215855 757 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Mir320-201ENSMUST00000083594 82 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Mir29c-201ENSMUST00000083614 88 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
Trem3Q9JKE1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm24582-201ENSMUST00000103967 103 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm22091-201ENSMUST00000116908 127 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm12351-201ENSMUST00000118727 292 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm12044-201ENSMUST00000120335 213 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm22227-201ENSMUST00000157356 259 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm17061-201ENSMUST00000163167 499 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm18397-201ENSMUST00000176704 587 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm25120-201ENSMUST00000180148 79 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm38238-201ENSMUST00000194334 346 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.14□□□□□ -2.23
Trem3Q9JKE1 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Mir421-201ENSMUST00000083575 76 ntBASIC1.14□□□□□ -2.23
Trem3Q9JKE1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trem3Q9JKE1 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
Trem3Q9JKE1 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms