Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm22611-201ENSMUST00000158288 150 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm8580-201ENSMUST00000160295 464 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Mir6375-201ENSMUST00000197176 95 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm25203-202ENSMUST00000200458 216 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm45815-201ENSMUST00000220241 146 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm25202-201ENSMUST00000082838 191 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm25203-201ENSMUST00000082842 215 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm23412-201ENSMUST00000083017 107 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm23679-201ENSMUST00000083161 119 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm26164-201ENSMUST00000083793 104 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Gm25937-201ENSMUST00000083912 107 ntBASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Copb1Q9JIF7 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Copb1Q9JIF7 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26504-201ENSMUST00000102033 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Mir687-201ENSMUST00000102166 89 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22936-201ENSMUST00000103955 126 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm11577-201ENSMUST00000118030 737 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm11598-201ENSMUST00000119257 357 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm23779-201ENSMUST00000157938 64 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm20672-201ENSMUST00000176605 261 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22258-201ENSMUST00000177645 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26502-201ENSMUST00000177732 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Mir5123-201ENSMUST00000177794 83 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25350-201ENSMUST00000177849 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm23446-201ENSMUST00000177977 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26201-201ENSMUST00000178047 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm24711-201ENSMUST00000178062 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm24609-201ENSMUST00000178166 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm23265-201ENSMUST00000178321 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22812-201ENSMUST00000178329 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26246-201ENSMUST00000178388 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22131-201ENSMUST00000178415 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25155-201ENSMUST00000178450 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm24760-201ENSMUST00000178530 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26032-201ENSMUST00000178535 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22285-201ENSMUST00000178576 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22417-201ENSMUST00000178656 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26270-201ENSMUST00000178690 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25210-201ENSMUST00000178813 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25157-201ENSMUST00000178914 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm23313-201ENSMUST00000178931 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm23089-201ENSMUST00000178947 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22046-201ENSMUST00000179027 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm24153-201ENSMUST00000179280 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25597-201ENSMUST00000179388 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22941-201ENSMUST00000179630 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25816-201ENSMUST00000179764 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26188-201ENSMUST00000179963 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm25471-201ENSMUST00000180126 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm26433-201ENSMUST00000180227 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm22128-201ENSMUST00000180346 94 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm29104-201ENSMUST00000186304 222 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm8242-202ENSMUST00000193056 475 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm37085-201ENSMUST00000193780 196 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm43284-201ENSMUST00000200103 253 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.26□□□□□ -1.89
Copb1Q9JIF7 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.25□□□□□ -1.89
Copb1Q9JIF7 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Copb1Q9JIF7 Mir499-201ENSMUST00000102357 79 ntBASIC3.25□□□□□ -1.89
Copb1Q9JIF7 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Copb1Q9JIF7 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms