Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm13386-201ENSMUST00000117677 124 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm12760-201ENSMUST00000117861 482 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm12646-201ENSMUST00000119144 238 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm14593-201ENSMUST00000119948 294 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm6762-201ENSMUST00000121769 289 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm24936-201ENSMUST00000122598 247 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm24958-201ENSMUST00000158009 97 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm24729-201ENSMUST00000158225 137 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm26171-201ENSMUST00000158422 131 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm24086-201ENSMUST00000175171 98 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Mir8116-201ENSMUST00000184134 97 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm43521-201ENSMUST00000197838 255 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm43107-201ENSMUST00000198729 255 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm45273-201ENSMUST00000211559 281 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm23377-201ENSMUST00000082943 126 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm23454-201ENSMUST00000083332 133 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Snord15a-201ENSMUST00000083888 148 ntBASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upf1Q9EPU0 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm26273-201ENSMUST00000104180 131 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm13329-201ENSMUST00000117063 265 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm13439-201ENSMUST00000117541 409 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm13967-201ENSMUST00000120404 380 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm22308-201ENSMUST00000177609 107 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm24415-201ENSMUST00000180218 107 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm26585-201ENSMUST00000180890 630 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm36946-201ENSMUST00000192706 435 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm44473-201ENSMUST00000204039 152 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm44960-201ENSMUST00000207403 141 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm44543-201ENSMUST00000209136 396 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm45296-201ENSMUST00000209625 205 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm24626-201ENSMUST00000082621 161 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm22997-201ENSMUST00000082845 107 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm25698-201ENSMUST00000082897 107 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm24042-201ENSMUST00000083114 103 ntBASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf1Q9EPU0 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm22779-201ENSMUST00000104085 107 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm12815-201ENSMUST00000121737 135 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm23232-201ENSMUST00000157300 105 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm22219-201ENSMUST00000157562 319 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm27747-201ENSMUST00000184707 85 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm7871-201ENSMUST00000195346 618 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm43415-201ENSMUST00000201934 750 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm44399-201ENSMUST00000205043 226 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm46389-201ENSMUST00000223199 392 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Mir202-201ENSMUST00000083568 72 ntBASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upf1Q9EPU0 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm24172-201ENSMUST00000104127 117 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Mir875-201ENSMUST00000104698 78 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm24014-201ENSMUST00000157728 157 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm24691-201ENSMUST00000157762 140 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm24487-201ENSMUST00000178017 63 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm23963-201ENSMUST00000179603 77 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms