Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15452-201ENSMUST00000119877 240 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22098-201ENSMUST00000157930 85 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22611-201ENSMUST00000158288 150 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm24572-201ENSMUST00000175505 88 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Mir8116-201ENSMUST00000184134 97 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37993-201ENSMUST00000195301 988 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm9068-201ENSMUST00000217393 455 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm6109-201ENSMUST00000223297 348 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22974-201ENSMUST00000083301 103 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25257-201ENSMUST00000083907 110 ntBASIC1.71□□□□□ -2.14
Ccdc3Q9D6Y1 Gm26080-201ENSMUST00000104069 131 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm12872-201ENSMUST00000121835 320 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm13602-201ENSMUST00000122405 493 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22382-201ENSMUST00000158185 130 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25658-201ENSMUST00000158472 128 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm24878-201ENSMUST00000158782 104 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm3102-201ENSMUST00000164236 489 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm6395-201ENSMUST00000167639 691 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25996-201ENSMUST00000175393 117 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm21744-201ENSMUST00000178403 662 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm21171-201ENSMUST00000180048 673 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm29413-201ENSMUST00000186019 880 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28700-201ENSMUST00000187614 579 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm29639-201ENSMUST00000188375 580 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28843-201ENSMUST00000189198 678 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm29546-201ENSMUST00000191171 678 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm38044-201ENSMUST00000192964 487 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm33354-201ENSMUST00000195448 906 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm43708-201ENSMUST00000198857 961 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Mir7215-201ENSMUST00000200383 51 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44794-201ENSMUST00000206550 411 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm46136-201ENSMUST00000214730 565 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm46994-201ENSMUST00000221523 219 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm7065-201ENSMUST00000222150 474 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm5955-201ENSMUST00000222712 219 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22265-201ENSMUST00000082947 116 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Mir301-201ENSMUST00000083655 86 ntBASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Ccdc3Q9D6Y1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15177-201ENSMUST00000120491 577 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm14770-201ENSMUST00000122197 312 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25335-201ENSMUST00000158043 103 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm17062-201ENSMUST00000166987 461 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm17164-201ENSMUST00000169013 506 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25194-201ENSMUST00000177987 79 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm21885-201ENSMUST00000178891 327 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm25873-201ENSMUST00000180317 107 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28000-201ENSMUST00000184380 85 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm5329-201ENSMUST00000186898 463 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37054-201ENSMUST00000193481 543 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm37319-201ENSMUST00000193500 636 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm9318-201ENSMUST00000222444 438 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15215-201ENSMUST00000117773 489 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm12926-201ENSMUST00000121158 409 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm14709-201ENSMUST00000121225 304 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm15281-201ENSMUST00000125181 351 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 U6.1-201ENSMUST00000157443 101 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm22316-201ENSMUST00000158012 216 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm5277-201ENSMUST00000164923 556 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm28825-201ENSMUST00000186233 238 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm42739-201ENSMUST00000200687 226 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Gm44125-201ENSMUST00000203068 448 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc3Q9D6Y1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms