Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm14013-201ENSMUST00000119006 270 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm13368-201ENSMUST00000122443 430 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm24962-201ENSMUST00000157917 109 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm4468-201ENSMUST00000170206 294 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm21885-201ENSMUST00000178891 327 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm37104-201ENSMUST00000193278 196 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.6□□□□□ -2.15
RTRAFQ9CQE8 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm25784-201ENSMUST00000122524 81 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Mir1942-201ENSMUST00000157274 63 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm24237-201ENSMUST00000157790 132 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm24997-201ENSMUST00000157910 105 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm24601-201ENSMUST00000157970 143 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Mir6907-201ENSMUST00000183764 71 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Mir222-201ENSMUST00000083537 79 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Gm24490-201ENSMUST00000083803 98 ntBASIC1.59□□□□□ -2.15
RTRAFQ9CQE8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
RTRAFQ9CQE8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.59□□□□□ -2.16
RTRAFQ9CQE8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Mir582-201ENSMUST00000103758 81 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm22782-201ENSMUST00000104082 132 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm24907-201ENSMUST00000116932 128 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm6071-201ENSMUST00000119561 440 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm25961-201ENSMUST00000157174 135 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm23713-201ENSMUST00000157353 70 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 U6.1-201ENSMUST00000157443 101 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm22615-201ENSMUST00000158102 70 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm3111-201ENSMUST00000167426 490 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm25996-201ENSMUST00000175393 117 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm27991-201ENSMUST00000184804 137 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28838-201ENSMUST00000186338 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm29635-201ENSMUST00000187221 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm29026-201ENSMUST00000187787 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28797-201ENSMUST00000188543 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28855-201ENSMUST00000188680 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28705-201ENSMUST00000189548 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28745-201ENSMUST00000190069 305 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28939-201ENSMUST00000190351 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm28223-201ENSMUST00000190469 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm29092-201ENSMUST00000190768 315 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Trbv24-201ENSMUST00000194614 347 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm32222-201ENSMUST00000203296 298 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm44449-201ENSMUST00000203610 153 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Mir323-201ENSMUST00000083683 86 ntBASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RTRAFQ9CQE8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm15714-201ENSMUST00000117168 250 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm12639-201ENSMUST00000121400 493 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm24846-201ENSMUST00000158033 108 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm22727-201ENSMUST00000158090 116 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm22389-201ENSMUST00000158193 301 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm18417-201ENSMUST00000176564 648 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm23402-201ENSMUST00000178130 107 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm6660-201ENSMUST00000179149 468 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm21638-201ENSMUST00000179473 836 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm24306-201ENSMUST00000180229 79 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm9022-202ENSMUST00000183285 483 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm28825-201ENSMUST00000186233 238 ntBASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
RTRAFQ9CQE8 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms