Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm22496-201ENSMUST00000104493 88 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm11065-201ENSMUST00000111462 228 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm15526-201ENSMUST00000112504 204 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 U6.1-201ENSMUST00000157443 101 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm25175-201ENSMUST00000178712 79 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm18433-201ENSMUST00000192747 197 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm23370-202ENSMUST00000197008 129 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm19709-201ENSMUST00000215403 482 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm46312-201ENSMUST00000220961 420 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm10298-201ENSMUST00000074801 265 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Gm25257-201ENSMUST00000083907 110 ntBASIC1.65□□□□□ -2.15
Rpa3Q9CQ71 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm14898-201ENSMUST00000120202 645 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm16428-201ENSMUST00000121193 723 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm23048-201ENSMUST00000157237 129 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm5277-201ENSMUST00000164923 556 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm21885-201ENSMUST00000178891 327 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm38149-201ENSMUST00000191943 339 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm38238-201ENSMUST00000194334 346 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm37029-201ENSMUST00000195773 239 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm45382-201ENSMUST00000210607 151 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm9068-201ENSMUST00000217393 455 ntBASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Rpa3Q9CQ71 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm22779-201ENSMUST00000104085 107 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm12656-201ENSMUST00000118149 577 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm12550-201ENSMUST00000118478 329 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm11352-201ENSMUST00000119264 517 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm24836-201ENSMUST00000122609 108 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm24846-201ENSMUST00000158033 108 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Mir6370-201ENSMUST00000183510 120 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm29429-201ENSMUST00000187071 121 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm37684-201ENSMUST00000192779 355 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm44024-201ENSMUST00000203008 476 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm44961-201ENSMUST00000207450 196 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm24610-201ENSMUST00000083270 109 ntBASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.63□□□□□ -2.15
Rpa3Q9CQ71 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm22713-201ENSMUST00000116895 130 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm12765-201ENSMUST00000117273 615 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm14899-201ENSMUST00000118673 548 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm23332-201ENSMUST00000157424 275 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm26177-201ENSMUST00000178683 107 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm27722-201ENSMUST00000183908 76 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28838-201ENSMUST00000186338 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm29635-201ENSMUST00000187221 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm29026-201ENSMUST00000187787 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28797-201ENSMUST00000188543 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28855-201ENSMUST00000188680 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28705-201ENSMUST00000189548 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28939-201ENSMUST00000190351 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm28223-201ENSMUST00000190469 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm29092-201ENSMUST00000190768 315 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm35558-202ENSMUST00000221819 499 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm16261-201ENSMUST00000096813 205 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Rpa3Q9CQ71 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Rpa3Q9CQ71 Gm14774-201ENSMUST00000117857 536 ntBASIC1.61□□□□□ -2.15
Rpa3Q9CQ71 Gm14775-201ENSMUST00000122089 310 ntBASIC1.61□□□□□ -2.15
Rpa3Q9CQ71 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Rpa3Q9CQ71 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms